Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Wdhd1-201ENSMUST00000111790 2962 ntTSL 2 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gsk3b-202ENSMUST00000114750 1750 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm40778-201ENSMUST00000217825 1344 ntBASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Ubap2l-220ENSMUST00000199834 3494 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Mir680-1-201ENSMUST00000102257 109 ntBASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm23701-201ENSMUST00000103893 110 ntBASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm13183-201ENSMUST00000118615 789 ntBASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm15696-201ENSMUST00000121730 445 ntBASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Mir6340-201ENSMUST00000183857 119 ntBASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm44044-201ENSMUST00000205178 1089 ntBASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 AC241621.1-201ENSMUST00000224499 430 ntBASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 AC133958.1-201ENSMUST00000227085 961 ntBASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 AC107452.2-201ENSMUST00000228415 363 ntBASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Pnmal1-201ENSMUST00000038163 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Mamdc4-201ENSMUST00000095117 3990 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 9330162B11Rik-201ENSMUST00000195397 2212 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Dbndd2-203ENSMUST00000109349 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm44317-201ENSMUST00000204314 4214 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm38024-201ENSMUST00000192338 2532 ntBASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm13302-201ENSMUST00000119405 1849 ntBASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sf3b2Q3UJB0 4933431E20Rik-210ENSMUST00000152663 2358 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm9776-201ENSMUST00000059598 2980 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Synj2-205ENSMUST00000115786 2531 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm42595-201ENSMUST00000196771 1607 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Lrguk-201ENSMUST00000070189 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 9630001P10Rik-202ENSMUST00000181335 3006 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm16630-201ENSMUST00000180741 3257 ntTSL 5 BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm26016-201ENSMUST00000104403 129 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm14248-201ENSMUST00000117790 544 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm23888-201ENSMUST00000122690 253 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm13548-201ENSMUST00000144688 385 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Dnajc5b-204ENSMUST00000165693 955 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm10591-201ENSMUST00000178168 402 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Ccl21b-202ENSMUST00000178864 402 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm27542-201ENSMUST00000184184 256 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm43558-201ENSMUST00000200155 210 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 AC152922.1-201ENSMUST00000216518 1232 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm33778-201ENSMUST00000216884 704 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 AC133203.1-201ENSMUST00000228241 301 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 AC122459.3-201ENSMUST00000228508 1042 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm23054-201ENSMUST00000082804 162 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Pparg-201ENSMUST00000000450 1767 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 AC123619.1-203ENSMUST00000225276 2757 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Gm45694-201ENSMUST00000212022 3251 ntBASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sf3b2Q3UJB0 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms