Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Trim43aQ3TL54 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm44417-201ENSMUST00000203298 3359 ntBASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm14427-201ENSMUST00000117183 635 ntBASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm13352-201ENSMUST00000117515 262 ntBASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm12708-202ENSMUST00000136941 1046 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC8.4□□□□□ -1.06
Trim43aQ3TL54 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm38306-201ENSMUST00000193954 237 ntBASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm36996-201ENSMUST00000194466 250 ntBASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm45900-201ENSMUST00000211879 409 ntBASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC8.4□□□□□ -1.06
Trim43aQ3TL54 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm10451-202ENSMUST00000219367 855 ntTSL 2 BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm5619-201ENSMUST00000071172 760 ntBASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.4□□□□□ -1.06
Trim43aQ3TL54 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim43aQ3TL54 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim43aQ3TL54 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim43aQ3TL54 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Trim43aQ3TL54 AC154482.1-201ENSMUST00000223248 2483 ntBASIC8.4□□□□□ -1.07
Trim43aQ3TL54 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Trim43aQ3TL54 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC8.4□□□□□ -1.07
Trim43aQ3TL54 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.07
Trim43aQ3TL54 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm22661-201ENSMUST00000104192 132 ntBASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm13682-201ENSMUST00000117524 702 ntBASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Sycn-201ENSMUST00000119180 556 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Rasgef1b-207ENSMUST00000166484 1296 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm8877-201ENSMUST00000172657 655 ntBASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm28980-201ENSMUST00000187877 219 ntBASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm17909-201ENSMUST00000207587 907 ntBASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm19810-201ENSMUST00000218521 251 ntBASIC8.39□□□□□ -1.07
Trim43aQ3TL54 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 AC154595.1-201ENSMUST00000225533 1059 ntBASIC8.39□□□□□ -1.07
Trim43aQ3TL54 CT009556.2-201ENSMUST00000227980 1123 ntBASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Cenpx-202ENSMUST00000055424 606 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
Trim43aQ3TL54 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms