Protein–RNA interactions for Protein: P55194

Sh3bp1, SH3 domain-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bp1P55194 AC142114.1-201ENSMUST00000227724 328 ntBASIC8.92□□□□□ -0.98
Sh3bp1P55194 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Zfp473-201ENSMUST00000060270 3800 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Gm4953-201ENSMUST00000077309 483 ntBASIC8.92□□□□□ -0.98
Sh3bp1P55194 Tac1-201ENSMUST00000090679 980 ntTSL 5 BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Tmem241-203ENSMUST00000092075 595 ntAPPRIS ALT2 TSL 3 BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.92□□□□□ -0.98
Sh3bp1P55194 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Cnpy1-203ENSMUST00000120068 2284 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Sh3bp1P55194 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Nmnat1-202ENSMUST00000105693 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Arhgap6-202ENSMUST00000087016 1310 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Gm25607-201ENSMUST00000104020 127 ntBASIC8.91□□□□□ -0.98
Sh3bp1P55194 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Gm17053-201ENSMUST00000163501 495 ntBASIC8.91□□□□□ -0.98
Sh3bp1P55194 Gm17139-201ENSMUST00000163802 571 ntTSL 5 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Gm18821-201ENSMUST00000184135 709 ntBASIC8.91□□□□□ -0.98
Sh3bp1P55194 Gm37444-201ENSMUST00000193605 439 ntBASIC8.91□□□□□ -0.98
Sh3bp1P55194 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.91□□□□□ -0.98
Sh3bp1P55194 Gm43797-201ENSMUST00000198221 532 ntBASIC8.91□□□□□ -0.98
Sh3bp1P55194 Gm42723-201ENSMUST00000199966 1044 ntBASIC8.91□□□□□ -0.98
Sh3bp1P55194 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 D330037F02Rik-202ENSMUST00000217400 1247 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 AC124736.1-201ENSMUST00000226382 419 ntBASIC8.91□□□□□ -0.98
Sh3bp1P55194 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Svs3b-201ENSMUST00000063132 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Glt8d2-202ENSMUST00000065815 1240 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Olfr979-201ENSMUST00000080835 1045 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Olfr1224-ps1-201ENSMUST00000099792 936 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Pkd2l2-201ENSMUST00000014647 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Klrb1c-203ENSMUST00000174404 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 4930466I24Rik-201ENSMUST00000144105 2264 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Sh3bp1P55194 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Gm43413-201ENSMUST00000200411 1566 ntBASIC8.9□□□□□ -0.98
Sh3bp1P55194 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Gm28229-201ENSMUST00000188747 2153 ntBASIC8.9□□□□□ -0.98
Sh3bp1P55194 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Sh3bp1P55194 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Ceacam1-202ENSMUST00000098668 1478 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Gm37107-201ENSMUST00000195326 2552 ntBASIC8.9□□□□□ -0.98
Sh3bp1P55194 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Gm6348-201ENSMUST00000200751 1443 ntBASIC8.9□□□□□ -0.98
Sh3bp1P55194 Gm6346-201ENSMUST00000201146 1443 ntBASIC8.9□□□□□ -0.98
Sh3bp1P55194 Asb11-202ENSMUST00000036858 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.9□□□□□ -0.98
Sh3bp1P55194 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC8.9□□□□□ -0.98
Sh3bp1P55194 CT025548.2-201ENSMUST00000226227 1329 ntBASIC8.9□□□□□ -0.98
Sh3bp1P55194 Arpc3-204ENSMUST00000111716 838 ntTSL 2 BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Rhox1-201ENSMUST00000115210 883 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Gm14336-201ENSMUST00000117491 475 ntBASIC8.9□□□□□ -0.98
Sh3bp1P55194 Gm13666-201ENSMUST00000120032 799 ntBASIC8.9□□□□□ -0.98
Sh3bp1P55194 Gm15873-201ENSMUST00000123390 761 ntTSL 3 BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 E330017L17Rik-204ENSMUST00000145196 876 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Sh3bp1P55194 Gm12930-201ENSMUST00000146679 676 ntTSL 3 BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms