Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC8.56□□□□□ -1.04
Sox1P53783 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm19231-201ENSMUST00000193212 830 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm4873-201ENSMUST00000199402 1203 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Gm40319-201ENSMUST00000199785 481 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Gm43226-201ENSMUST00000202438 259 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Gm8479-201ENSMUST00000203825 718 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Gm44422-201ENSMUST00000204142 1025 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Gm44559-201ENSMUST00000207177 1012 ntBASIC8.56□□□□□ -1.04
Sox1P53783 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm18024-201ENSMUST00000218516 690 ntBASIC8.56□□□□□ -1.04
Sox1P53783 AC159622.1-201ENSMUST00000221004 554 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.56□□□□□ -1.04
Sox1P53783 CT030238.4-202ENSMUST00000226143 745 ntBASIC8.56□□□□□ -1.04
Sox1P53783 AC132833.4-201ENSMUST00000228313 203 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Sox1P53783 Tac1-201ENSMUST00000090679 980 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Jade1-206ENSMUST00000191952 3327 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 CT010465.1-202ENSMUST00000221816 1355 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Dynlt3-201ENSMUST00000033519 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm37518-201ENSMUST00000194930 2603 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 AC122878.1-201ENSMUST00000227716 1460 ntBASIC8.56□□□□□ -1.04
Sox1P53783 Pla2g4c-203ENSMUST00000108528 3390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Tspan9-203ENSMUST00000112173 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sox1P53783 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC8.56□□□□□ -1.04
Sox1P53783 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC8.56□□□□□ -1.04
Sox1P53783 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Dnm3-203ENSMUST00000159763 1305 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Glipr1l2-201ENSMUST00000020434 1879 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Nolc1-209ENSMUST00000225780 2978 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Sox1P53783 Fam212b-201ENSMUST00000066610 4701 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Gm26782-201ENSMUST00000181482 2513 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC8.55□□□□□ -1.04
Sox1P53783 Gm5065-201ENSMUST00000056639 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Gm44550-201ENSMUST00000207311 2058 ntBASIC8.55□□□□□ -1.04
Sox1P53783 A3galt2-201ENSMUST00000030585 3390 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Gnl3l-202ENSMUST00000112691 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Cnpy1-203ENSMUST00000120068 2284 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Gnl3l-201ENSMUST00000026297 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Trappc9-201ENSMUST00000023276 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Vti1a-202ENSMUST00000223690 4175 ntBASIC8.55□□□□□ -1.04
Sox1P53783 D930048N14Rik-201ENSMUST00000064493 3426 ntAPPRIS P5 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Sox1P53783 Klhl28-201ENSMUST00000021331 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sox1P53783 Fam124b-201ENSMUST00000058748 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms