Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Sytl4-201ENSMUST00000033608 3753 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 CT025639.1-201ENSMUST00000223906 1375 ntBASIC10.28□□□□□ -0.76
Col18a1P39061 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Fut10-203ENSMUST00000161502 3527 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 AC154377.1-201ENSMUST00000226752 4979 ntBASIC10.28□□□□□ -0.76
Col18a1P39061 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC10.28□□□□□ -0.76
Col18a1P39061 Epha5-203ENSMUST00000113399 5166 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Col18a1P39061 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Col18a1P39061 Adra1a-203ENSMUST00000159365 4118 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Col18a1P39061 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Zscan29-202ENSMUST00000110661 5072 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Col18a1P39061 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Map4k4-217ENSMUST00000195636 4082 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Col18a1P39061 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Gm14727-201ENSMUST00000118526 525 ntBASIC10.28□□□□□ -0.76
Col18a1P39061 Gm12244-201ENSMUST00000119500 291 ntBASIC10.28□□□□□ -0.76
Col18a1P39061 Gm11472-201ENSMUST00000121305 556 ntBASIC10.28□□□□□ -0.76
Col18a1P39061 Gm5166-201ENSMUST00000121332 573 ntBASIC10.28□□□□□ -0.76
Col18a1P39061 Gm14721-201ENSMUST00000121381 525 ntBASIC10.28□□□□□ -0.76
Col18a1P39061 Gm23430-201ENSMUST00000122490 314 ntBASIC10.28□□□□□ -0.76
Col18a1P39061 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC10.28□□□□□ -0.76
Col18a1P39061 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC10.28□□□□□ -0.76
Col18a1P39061 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC10.28□□□□□ -0.76
Col18a1P39061 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Col18a1P39061 CT030185.2-201ENSMUST00000222614 1310 ntBASIC10.28□□□□□ -0.76
Col18a1P39061 Tmem268-202ENSMUST00000080336 3630 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Pramel-201ENSMUST00000118979 1383 ntBASIC10.28□□□□□ -0.76
Col18a1P39061 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC10.28□□□□□ -0.76
Col18a1P39061 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col18a1P39061 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.76
Col18a1P39061 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC10.27□□□□□ -0.76
Col18a1P39061 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC10.27□□□□□ -0.76
Col18a1P39061 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Col18a1P39061 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Col18a1P39061 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Col18a1P39061 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.27□□□□□ -0.76
Col18a1P39061 Nbr1-206ENSMUST00000107213 4339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Apc-ps1-201ENSMUST00000119356 470 ntBASIC10.27□□□□□ -0.77
Col18a1P39061 Gm12879-201ENSMUST00000120003 1182 ntBASIC10.27□□□□□ -0.77
Col18a1P39061 Gm12518-201ENSMUST00000122075 779 ntBASIC10.27□□□□□ -0.77
Col18a1P39061 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC10.27□□□□□ -0.77
Col18a1P39061 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC10.27□□□□□ -0.77
Col18a1P39061 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC10.27□□□□□ -0.77
Col18a1P39061 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC10.27□□□□□ -0.77
Col18a1P39061 AC155709.1-201ENSMUST00000218794 162 ntBASIC10.27□□□□□ -0.77
Col18a1P39061 AC135086.1-201ENSMUST00000228621 817 ntBASIC10.27□□□□□ -0.77
Col18a1P39061 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Pde8b-210ENSMUST00000162412 4035 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Col18a1P39061 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Col18a1P39061 AC159813.1-201ENSMUST00000222671 2263 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Col18a1P39061 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Col18a1P39061 Gm6640-201ENSMUST00000120629 1587 ntBASIC10.27□□□□□ -0.77
Col18a1P39061 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Champ1-202ENSMUST00000128557 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Gle1-201ENSMUST00000019859 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Col18a1P39061 Myo6-212ENSMUST00000184480 4139 ntTSL 5 BASIC10.27□□□□□ -0.77
Col18a1P39061 Washc4-201ENSMUST00000038388 5858 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Col18a1P39061 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Col18a1P39061 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col18a1P39061 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm14747-201ENSMUST00000149888 984 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm25505-201ENSMUST00000157220 246 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm22518-201ENSMUST00000158267 68 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm43287-201ENSMUST00000197747 600 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm44538-201ENSMUST00000205615 348 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Gm10123-201ENSMUST00000075723 490 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm42546-201ENSMUST00000201584 2592 ntBASIC10.26□□□□□ -0.77
Col18a1P39061 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Iqcg-202ENSMUST00000115100 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Col18a1P39061 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms