Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Sdc1P18828 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sdc1P18828 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.35□□□□□ -1.39
Sdc1P18828 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Sdc1P18828 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
Sdc1P18828 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC6.34□□□□□ -1.39
Sdc1P18828 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Sdc1P18828 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Klrb1c-203ENSMUST00000174404 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm6755-201ENSMUST00000100598 864 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm6740-201ENSMUST00000100617 864 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm23439-201ENSMUST00000104292 132 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm15661-201ENSMUST00000117390 556 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm12180-201ENSMUST00000120905 661 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm25545-201ENSMUST00000122673 323 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm17069-201ENSMUST00000172256 490 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC6.34□□□□□ -1.39
Sdc1P18828 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm27150-201ENSMUST00000183441 1038 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm27228-201ENSMUST00000184500 1038 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm37282-201ENSMUST00000191987 164 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm37665-201ENSMUST00000192353 149 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm19035-202ENSMUST00000194575 959 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm43835-201ENSMUST00000195932 149 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm43535-201ENSMUST00000197846 164 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm44426-201ENSMUST00000204258 355 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm44379-201ENSMUST00000204501 164 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm44268-201ENSMUST00000204814 164 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm34322-201ENSMUST00000214224 719 ntTSL 5 BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm31698-201ENSMUST00000214227 430 ntTSL 2 BASIC6.34□□□□□ -1.39
Sdc1P18828 AC192434.1-201ENSMUST00000225464 390 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Tmco5-201ENSMUST00000028834 1164 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Gm22054-201ENSMUST00000083395 155 ntBASIC6.34□□□□□ -1.39
Sdc1P18828 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Sdc1P18828 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sdc1P18828 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Sdc1P18828 AC126028.1-201ENSMUST00000226218 2123 ntBASIC6.34□□□□□ -1.4
Sdc1P18828 Gm38302-201ENSMUST00000191676 2076 ntBASIC6.34□□□□□ -1.4
Sdc1P18828 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sdc1P18828 AC156790.4-202ENSMUST00000228838 1418 ntBASIC6.33□□□□□ -1.4
Sdc1P18828 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sdc1P18828 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sdc1P18828 Gm4863-201ENSMUST00000196907 1381 ntBASIC6.33□□□□□ -1.4
Sdc1P18828 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sdc1P18828 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sdc1P18828 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sdc1P18828 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sdc1P18828 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.33□□□□□ -1.4
Sdc1P18828 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Sdc1P18828 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Sdc1P18828 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sdc1P18828 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Sdc1P18828 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sdc1P18828 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sdc1P18828 Scgb1b30-201ENSMUST00000108083 491 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sdc1P18828 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sdc1P18828 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sdc1P18828 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC6.33□□□□□ -1.4
Sdc1P18828 Gm11875-201ENSMUST00000118187 799 ntBASIC6.33□□□□□ -1.4
Sdc1P18828 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC6.33□□□□□ -1.4
Sdc1P18828 Itih5l-ps-202ENSMUST00000148862 808 ntTSL 3 BASIC6.33□□□□□ -1.4
Sdc1P18828 Gm2666-201ENSMUST00000160587 891 ntBASIC6.33□□□□□ -1.4
Sdc1P18828 Gm6586-201ENSMUST00000167028 643 ntBASIC6.33□□□□□ -1.4
Sdc1P18828 Gm8857-201ENSMUST00000170064 1102 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sdc1P18828 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC6.33□□□□□ -1.4
Sdc1P18828 n-R5s210-201ENSMUST00000177688 119 ntBASIC6.33□□□□□ -1.4
Sdc1P18828 Gm22347-201ENSMUST00000180276 132 ntBASIC6.33□□□□□ -1.4
Sdc1P18828 Gm8529-201ENSMUST00000183298 745 ntBASIC6.33□□□□□ -1.4
Sdc1P18828 Gm27406-201ENSMUST00000184881 182 ntBASIC6.33□□□□□ -1.4
Sdc1P18828 Gm18797-201ENSMUST00000190809 1174 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms