Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm34322-201ENSMUST00000214224 719 ntTSL 5 BASIC6.48□□□□□ -1.37
Cdx1P18111 Gm33700-201ENSMUST00000215123 697 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 AC153864.1-201ENSMUST00000218482 523 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 AC153974.1-202ENSMUST00000218700 678 ntTSL 3 BASIC6.48□□□□□ -1.37
Cdx1P18111 Xcl1-201ENSMUST00000027860 523 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Gm10039-201ENSMUST00000081241 411 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm5560-201ENSMUST00000086918 892 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Cdx1P18111 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Gm37163-201ENSMUST00000195439 1690 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC6.48□□□□□ -1.37
Cdx1P18111 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Cdx1P18111 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.48□□□□□ -1.37
Cdx1P18111 AC117656.3-203ENSMUST00000225007 1809 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 4930466I24Rik-201ENSMUST00000144105 2264 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.47□□□□□ -1.37
Cdx1P18111 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdx1P18111 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC6.47□□□□□ -1.37
Cdx1P18111 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdx1P18111 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.47□□□□□ -1.37
Cdx1P18111 Gm15009-201ENSMUST00000121387 322 ntBASIC6.47□□□□□ -1.37
Cdx1P18111 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Cdx1P18111 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Gm17195-201ENSMUST00000170289 428 ntBASIC6.47□□□□□ -1.37
Cdx1P18111 Gm6410-201ENSMUST00000181337 1105 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Gm27927-201ENSMUST00000183791 126 ntBASIC6.47□□□□□ -1.37
Cdx1P18111 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.47□□□□□ -1.37
Cdx1P18111 4930535E02Rik-201ENSMUST00000194463 655 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Gm8896-201ENSMUST00000197434 1106 ntBASIC6.47□□□□□ -1.37
Cdx1P18111 Kmt5a-212ENSMUST00000198451 1032 ntTSL 3 BASIC6.47□□□□□ -1.37
Cdx1P18111 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdx1P18111 Vmn2r-ps88-201ENSMUST00000209168 804 ntBASIC6.47□□□□□ -1.37
Cdx1P18111 Olfr770-201ENSMUST00000062314 936 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Cdx1P18111 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Mrgprx1-201ENSMUST00000094390 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Defa29-201ENSMUST00000098890 508 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Cdx1P18111 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC6.47□□□□□ -1.37
Cdx1P18111 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdx1P18111 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Cdx1P18111 4933408N05Rik-201ENSMUST00000139864 1584 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdx1P18111 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdx1P18111 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Cdx1P18111 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Cdx1P18111 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Cdx1P18111 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Gm26597-201ENSMUST00000181648 1477 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
Cdx1P18111 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.47□□□□□ -1.37
Cdx1P18111 AC164437.2-202ENSMUST00000227367 1639 ntBASIC6.47□□□□□ -1.37
Cdx1P18111 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Gca-201ENSMUST00000028257 3330 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cdx1P18111 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx1P18111 Morf4l2-214ENSMUST00000166930 1926 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
Cdx1P18111 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx1P18111 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx1P18111 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx1P18111 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
Cdx1P18111 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Cdx1P18111 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.46□□□□□ -1.37
Cdx1P18111 Gm11232-201ENSMUST00000084489 1680 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Cdx1P18111 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.46□□□□□ -1.37
Cdx1P18111 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx1P18111 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx1P18111 Gm25613-201ENSMUST00000104012 129 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 n-R5s165-201ENSMUST00000104074 100 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Gm23127-201ENSMUST00000104261 130 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Rhox4d-201ENSMUST00000115175 936 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx1P18111 Rhox3e-202ENSMUST00000115198 1053 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx1P18111 Rhox3a-201ENSMUST00000115203 1053 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx1P18111 Gm4773-201ENSMUST00000120392 702 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Gm13188-201ENSMUST00000121150 564 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Gm4908-201ENSMUST00000121923 1005 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdx1P18111 Uba52-206ENSMUST00000135446 520 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Cdx1P18111 Gm11382-201ENSMUST00000140484 179 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Gm15646-201ENSMUST00000143317 766 ntTSL 5 BASIC6.46□□□□□ -1.38
Cdx1P18111 Gm22587-201ENSMUST00000157511 298 ntBASIC6.46□□□□□ -1.38
Cdx1P18111 Gm26357-201ENSMUST00000158218 115 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms