Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col1a1P11087 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col1a1P11087 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col1a1P11087 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col1a1P11087 Cblb-205ENSMUST00000227756 3378 ntBASIC9.23□□□□□ -0.93
Col1a1P11087 Tmem63c-202ENSMUST00000131878 3311 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Col1a1P11087 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col1a1P11087 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col1a1P11087 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col1a1P11087 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col1a1P11087 Olfr52-202ENSMUST00000215138 2751 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Col1a1P11087 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col1a1P11087 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Col1a1P11087 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col1a1P11087 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col1a1P11087 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC9.22□□□□□ -0.93
Col1a1P11087 Gm25276-201ENSMUST00000104300 124 ntBASIC9.22□□□□□ -0.93
Col1a1P11087 Gm12375-201ENSMUST00000119331 921 ntBASIC9.22□□□□□ -0.93
Col1a1P11087 Gm14824-201ENSMUST00000119421 737 ntBASIC9.22□□□□□ -0.93
Col1a1P11087 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Gm26353-201ENSMUST00000158224 255 ntBASIC9.22□□□□□ -0.93
Col1a1P11087 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC9.22□□□□□ -0.93
Col1a1P11087 Gm26179-201ENSMUST00000177723 132 ntBASIC9.22□□□□□ -0.93
Col1a1P11087 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Col1a1P11087 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Col1a1P11087 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Col1a1P11087 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Gm29562-201ENSMUST00000190113 904 ntBASIC9.22□□□□□ -0.93
Col1a1P11087 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC9.22□□□□□ -0.93
Col1a1P11087 Gm43836-201ENSMUST00000196532 381 ntBASIC9.22□□□□□ -0.93
Col1a1P11087 Gm42634-201ENSMUST00000197362 381 ntBASIC9.22□□□□□ -0.93
Col1a1P11087 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC9.22□□□□□ -0.93
Col1a1P11087 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Col1a1P11087 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Col1a1P11087 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Col1a1P11087 Pxmp4-201ENSMUST00000000896 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Col1a1P11087 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC9.22□□□□□ -0.93
Col1a1P11087 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
Col1a1P11087 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Gm3822-201ENSMUST00000201941 2935 ntBASIC9.22□□□□□ -0.93
Col1a1P11087 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 AC107452.3-201ENSMUST00000228807 1308 ntBASIC9.22□□□□□ -0.93
Col1a1P11087 Gm28720-201ENSMUST00000190728 3156 ntBASIC9.22□□□□□ -0.93
Col1a1P11087 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col1a1P11087 Clasp1-221ENSMUST00000191823 3916 ntTSL 5 BASIC9.22□□□□□ -0.93
Col1a1P11087 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.21□□□□□ -0.93
Col1a1P11087 Gm25989-201ENSMUST00000158761 133 ntBASIC9.21□□□□□ -0.93
Col1a1P11087 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Col1a1P11087 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC9.21□□□□□ -0.93
Col1a1P11087 Pea15b-201ENSMUST00000182806 387 ntBASIC9.21□□□□□ -0.93
Col1a1P11087 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC9.21□□□□□ -0.93
Col1a1P11087 Gm2505-201ENSMUST00000200413 825 ntBASIC9.21□□□□□ -0.93
Col1a1P11087 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Col1a1P11087 Gm45446-201ENSMUST00000209348 216 ntBASIC9.21□□□□□ -0.93
Col1a1P11087 Olfr471-201ENSMUST00000210091 936 ntBASIC9.21□□□□□ -0.93
Col1a1P11087 AC163296.1-202ENSMUST00000218395 661 ntBASIC9.21□□□□□ -0.93
Col1a1P11087 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC9.21□□□□□ -0.93
Col1a1P11087 AC163296.1-201ENSMUST00000220004 1266 ntBASIC9.21□□□□□ -0.93
Col1a1P11087 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC9.21□□□□□ -0.93
Col1a1P11087 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC9.21□□□□□ -0.93
Col1a1P11087 AC159188.3-201ENSMUST00000224199 880 ntBASIC9.21□□□□□ -0.93
Col1a1P11087 AC158981.1-201ENSMUST00000226943 1205 ntBASIC9.21□□□□□ -0.93
Col1a1P11087 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Col1a1P11087 AC133598.5-201ENSMUST00000224937 1517 ntBASIC9.21□□□□□ -0.93
Col1a1P11087 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Col1a1P11087 Gm37863-201ENSMUST00000194911 1457 ntBASIC9.21□□□□□ -0.93
Col1a1P11087 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Col1a1P11087 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC9.21□□□□□ -0.93
Col1a1P11087 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Col1a1P11087 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Col1a1P11087 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col1a1P11087 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col1a1P11087 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col1a1P11087 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col1a1P11087 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Col1a1P11087 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col1a1P11087 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col1a1P11087 Gm44509-201ENSMUST00000205400 1324 ntBASIC9.21□□□□□ -0.94
Col1a1P11087 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col1a1P11087 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col1a1P11087 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col1a1P11087 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Col1a1P11087 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col1a1P11087 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms