Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC6.42□□□□□ -1.38
Hmgb3O54879 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC6.42□□□□□ -1.38
Hmgb3O54879 4833417C18Rik-201ENSMUST00000146868 1269 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm12305-201ENSMUST00000151817 407 ntTSL 2 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm15841-201ENSMUST00000160540 517 ntTSL 3 BASIC6.42□□□□□ -1.38
Hmgb3O54879 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm25951-201ENSMUST00000175330 64 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 1700019D03Rik-204ENSMUST00000186266 623 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm37282-201ENSMUST00000191987 164 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm37665-201ENSMUST00000192353 149 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm36980-201ENSMUST00000195643 622 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm43835-201ENSMUST00000195932 149 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm43535-201ENSMUST00000197846 164 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm42429-201ENSMUST00000198579 558 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm44379-201ENSMUST00000204501 164 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm44268-201ENSMUST00000204814 164 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm44778-201ENSMUST00000206447 668 ntTSL 3 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm17995-201ENSMUST00000209266 530 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm45674-201ENSMUST00000210043 450 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm45436-201ENSMUST00000210729 469 ntTSL 5 BASIC6.42□□□□□ -1.38
Hmgb3O54879 CT030709.1-201ENSMUST00000214443 443 ntTSL 5 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
Hmgb3O54879 AC192333.4-201ENSMUST00000224269 981 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 AC171241.2-201ENSMUST00000228744 892 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm7936-201ENSMUST00000069529 375 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Rpl32-201ENSMUST00000081840 517 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm24146-201ENSMUST00000082760 321 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Btg1-ps2-201ENSMUST00000089060 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm15575-201ENSMUST00000119414 1581 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm37744-201ENSMUST00000194616 1590 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm43681-201ENSMUST00000201581 1903 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Olfr462-202ENSMUST00000213672 2021 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.41□□□□□ -1.38
Hmgb3O54879 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm6820-201ENSMUST00000188803 2173 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm42546-201ENSMUST00000201584 2592 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 AC168056.4-201ENSMUST00000223835 2567 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Defb20-201ENSMUST00000109836 690 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm14099-201ENSMUST00000117769 605 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm7541-201ENSMUST00000118361 535 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Uqcc2-202ENSMUST00000118613 426 ntTSL 3 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm13252-201ENSMUST00000119355 321 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm16210-201ENSMUST00000122161 610 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 4933406K04Rik-201ENSMUST00000124068 1136 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 E130120K24Rik-201ENSMUST00000129910 556 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hmgb3O54879 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm25394-201ENSMUST00000157338 133 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Mir1932-201ENSMUST00000157390 90 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm20508-201ENSMUST00000172480 487 ntTSL 2 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Zfp419-201ENSMUST00000173446 916 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm8257-203ENSMUST00000179215 489 ntTSL 5 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm933-201ENSMUST00000179384 679 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm9381-201ENSMUST00000182285 1012 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm17764-201ENSMUST00000185925 391 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Ighv1-8-201ENSMUST00000192236 293 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm37787-201ENSMUST00000192524 585 ntTSL 5 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm42760-201ENSMUST00000199814 311 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 B230311B06Rik-202ENSMUST00000207610 687 ntTSL 3 BASIC6.41□□□□□ -1.38
Hmgb3O54879 Gm45698-201ENSMUST00000208537 1135 ntBASIC6.41□□□□□ -1.38
Hmgb3O54879 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms