Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Npy-201ENSMUST00000031843 566 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm6369-201ENSMUST00000069626 412 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Mir365-2-201ENSMUST00000083555 112 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm10581-201ENSMUST00000097986 231 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Defa29-201ENSMUST00000098890 508 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Ttc17-204ENSMUST00000111238 4590 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 AC156025.2-201ENSMUST00000225907 1533 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm43504-201ENSMUST00000196056 2038 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm42848-201ENSMUST00000201477 2022 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 C79130-201ENSMUST00000199610 4296 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Serpina3f-202ENSMUST00000121337 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm10797-201ENSMUST00000099661 2222 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 AC154207.1-201ENSMUST00000221924 1483 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Lrrc23-201ENSMUST00000032218 1470 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm44417-201ENSMUST00000203298 3359 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Dcstamp-205ENSMUST00000228556 1684 ntBASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm26953-205ENSMUST00000212599 1435 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Kcnip4-206ENSMUST00000175660 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 Lrtm1-202ENSMUST00000224708 1646 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Trim39Q9ESN2 C330002G04Rik-201ENSMUST00000181623 2054 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Etfbkmt-203ENSMUST00000111548 1398 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Olfr96-202ENSMUST00000213475 1834 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm15577-201ENSMUST00000144350 2293 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Pde10a-203ENSMUST00000115708 2471 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Trim13-201ENSMUST00000039562 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm28095-201ENSMUST00000186343 1515 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 AC154729.1-201ENSMUST00000224481 1501 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Tex52-201ENSMUST00000100926 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Mir744-201ENSMUST00000103261 100 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm24985-201ENSMUST00000104455 129 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm23987-201ENSMUST00000117039 129 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm13700-201ENSMUST00000118624 1128 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm14065-201ENSMUST00000120848 585 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm12338-201ENSMUST00000122170 192 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 4930519G04Rik-203ENSMUST00000134389 731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm14210-201ENSMUST00000140949 503 ntTSL 2 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm22881-201ENSMUST00000157747 134 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm26371-201ENSMUST00000157829 104 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm23833-201ENSMUST00000158900 252 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Sla-204ENSMUST00000168522 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm18415-201ENSMUST00000177464 647 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Sbp-207ENSMUST00000183252 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Ppp1r2-ps7-202ENSMUST00000185057 763 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm29304-201ENSMUST00000186555 695 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm29223-201ENSMUST00000188867 695 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Kcnk2-208ENSMUST00000194172 1200 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm30173-201ENSMUST00000195035 1128 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm43664-201ENSMUST00000196038 734 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm42164-201ENSMUST00000198881 379 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm18611-201ENSMUST00000200334 1118 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Fcer2a-207ENSMUST00000208492 1053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm18857-201ENSMUST00000210421 901 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm43154-213ENSMUST00000210985 932 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 AC124778.2-201ENSMUST00000215837 453 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Zkscan7-205ENSMUST00000216462 990 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm29154-249ENSMUST00000217020 847 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 9530020I12Rik-202ENSMUST00000218368 1235 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 AC155929.2-201ENSMUST00000218541 307 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm5191-201ENSMUST00000222882 1236 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Gm7979-201ENSMUST00000223009 1025 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 AC154314.1-201ENSMUST00000223995 2996 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 AC154669.1-201ENSMUST00000224405 482 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 AC140799.1-201ENSMUST00000228866 787 ntBASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Sbp-201ENSMUST00000024940 833 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Try4-201ENSMUST00000031913 801 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim39Q9ESN2 Hspb3-201ENSMUST00000054650 781 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms