Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim16Q99PP9 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Trim16Q99PP9 Gm37321-201ENSMUST00000195742 1872 ntBASIC7.79□□□□□ -1.16
Trim16Q99PP9 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim16Q99PP9 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Asb11-202ENSMUST00000036858 1445 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm14630-201ENSMUST00000118057 246 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm15355-201ENSMUST00000118929 285 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm11295-201ENSMUST00000121379 803 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm26184-201ENSMUST00000157686 131 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm23497-201ENSMUST00000157738 130 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm17068-201ENSMUST00000163135 980 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm18988-201ENSMUST00000205601 746 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm5609-201ENSMUST00000210008 1267 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm7850-201ENSMUST00000212909 712 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm5173-201ENSMUST00000219616 950 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Gm8153-201ENSMUST00000219844 952 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 AL645704.1-201ENSMUST00000221642 604 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 CT033774.2-201ENSMUST00000222079 256 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 AC123738.1-201ENSMUST00000224796 773 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 AC171003.1-201ENSMUST00000221667 1665 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC7.78□□□□□ -1.16
Trim16Q99PP9 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Trim16Q99PP9 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Trim16Q99PP9 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
Trim16Q99PP9 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Trim16Q99PP9 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm37499-201ENSMUST00000194683 3478 ntBASIC7.77□□□□□ -1.17
Trim16Q99PP9 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm23192-201ENSMUST00000102434 96 ntBASIC7.77□□□□□ -1.17
Trim16Q99PP9 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Defa-ps4-201ENSMUST00000118021 183 ntBASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm15220-201ENSMUST00000120730 379 ntBASIC7.77□□□□□ -1.17
Trim16Q99PP9 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm8065-201ENSMUST00000164048 605 ntBASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm7115-201ENSMUST00000193706 832 ntBASIC7.77□□□□□ -1.17
Trim16Q99PP9 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 AC132304.1-201ENSMUST00000218860 135 ntBASIC7.77□□□□□ -1.17
Trim16Q99PP9 AC122539.2-201ENSMUST00000220207 404 ntBASIC7.77□□□□□ -1.17
Trim16Q99PP9 AC192333.4-201ENSMUST00000224269 981 ntBASIC7.77□□□□□ -1.17
Trim16Q99PP9 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm5619-201ENSMUST00000071172 760 ntBASIC7.77□□□□□ -1.17
Trim16Q99PP9 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm6786-201ENSMUST00000203165 1915 ntBASIC7.77□□□□□ -1.17
Trim16Q99PP9 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Trim16Q99PP9 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim16Q99PP9 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms