Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm42811-201ENSMUST00000201951 2768 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm22284-201ENSMUST00000104132 132 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm9506-201ENSMUST00000118516 320 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm3208-201ENSMUST00000168281 427 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 AC131029.2-201ENSMUST00000226696 628 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Adh6a-201ENSMUST00000013455 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm38380-201ENSMUST00000195718 2248 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm37289-201ENSMUST00000195409 1402 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Sox5-204ENSMUST00000111748 1734 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm16073-201ENSMUST00000116032 517 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm7369-201ENSMUST00000192738 936 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm44221-201ENSMUST00000203552 388 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm17995-201ENSMUST00000209266 530 ntBASIC7.73□□□□□ -1.17
Cdh23Q99PF4 Gm43023-201ENSMUST00000197583 2106 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Gm16072-201ENSMUST00000119574 2377 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Gm13750-201ENSMUST00000117621 465 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 AC123705.1-201ENSMUST00000222512 2058 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Ipo11-202ENSMUST00000080856 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Utrn-204ENSMUST00000217994 3161 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Gm22707-201ENSMUST00000103834 110 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Gm19047-201ENSMUST00000220922 1099 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Gm37499-201ENSMUST00000194683 3478 ntBASIC7.72□□□□□ -1.17
Cdh23Q99PF4 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Cspp1-201ENSMUST00000071087 4355 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Cdh23Q99PF4 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Rpa1-202ENSMUST00000092907 5077 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Rpl37rt-202ENSMUST00000124641 294 ntBASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Gm44192-201ENSMUST00000204195 556 ntBASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Cdh23Q99PF4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms