Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ccnt1-201ENSMUST00000012104 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Tcf23-201ENSMUST00000006818 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Nup107-202ENSMUST00000167943 3098 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Olfr173-202ENSMUST00000206205 2778 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Sez6l2-202ENSMUST00000106333 3595 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Lrtm2-202ENSMUST00000112756 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Gm20136-201ENSMUST00000207501 891 ntBASIC10.06□□□□□ -0.8
RtcbQ99LF4 Gm4800-201ENSMUST00000215776 1266 ntBASIC10.06□□□□□ -0.8
RtcbQ99LF4 AC139323.1-201ENSMUST00000223370 1040 ntBASIC10.06□□□□□ -0.8
RtcbQ99LF4 AC134913.1-201ENSMUST00000224563 504 ntBASIC10.06□□□□□ -0.8
RtcbQ99LF4 AC157572.1-201ENSMUST00000227187 825 ntBASIC10.06□□□□□ -0.8
RtcbQ99LF4 AC130673.1-201ENSMUST00000227992 435 ntBASIC10.06□□□□□ -0.8
RtcbQ99LF4 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC10.06□□□□□ -0.8
RtcbQ99LF4 Mir138-2-201ENSMUST00000083578 71 ntBASIC10.06□□□□□ -0.8
RtcbQ99LF4 Gja1-206ENSMUST00000220069 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Tro-207ENSMUST00000163969 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Selenop-203ENSMUST00000159216 2085 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Serpina3n-201ENSMUST00000021506 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Panx3-201ENSMUST00000011262 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Nefm-201ENSMUST00000022638 3334 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Tmem181b-ps-202ENSMUST00000180035 2426 ntTSL 5 BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Unc13d-202ENSMUST00000106450 4046 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
RtcbQ99LF4 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Samd3-201ENSMUST00000060716 1874 ntAPPRIS P4 TSL 5 BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Nol11-201ENSMUST00000018577 3158 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Arhgap27-201ENSMUST00000041385 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
RtcbQ99LF4 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 F730016J06Rik-202ENSMUST00000128888 3699 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Eri2-207ENSMUST00000150844 3564 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Mirg-204ENSMUST00000182185 3822 ntTSL 5 BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm37066-201ENSMUST00000192713 2061 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Slc2a5-201ENSMUST00000030826 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm15161-201ENSMUST00000117340 387 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm12788-201ENSMUST00000119090 308 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm13726-201ENSMUST00000121278 794 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm8715-201ENSMUST00000162728 531 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 n-R5s115-201ENSMUST00000179019 119 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm7560-201ENSMUST00000187748 873 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Ighv1-73-201ENSMUST00000197435 352 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm42734-201ENSMUST00000201656 878 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm8077-201ENSMUST00000209221 1024 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 AC153544.1-201ENSMUST00000217988 400 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 AC154361.1-201ENSMUST00000225694 745 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
RtcbQ99LF4 n-R5s193-201ENSMUST00000082864 109 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Rps6ka1-205ENSMUST00000157067 2637 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm38147-201ENSMUST00000192397 1798 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 AC156273.1-201ENSMUST00000214570 2762 ntTSL 5 BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gria2-202ENSMUST00000107745 4026 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Plcg2-201ENSMUST00000081232 4298 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Zfp946-202ENSMUST00000120222 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Srp54b-201ENSMUST00000164243 2317 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm44848-201ENSMUST00000207808 3234 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
RtcbQ99LF4 Gm37731-201ENSMUST00000194545 2237 ntBASIC10.05□□□□□ -0.8
RtcbQ99LF4 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RtcbQ99LF4 CT009515.4-201ENSMUST00000228165 1494 ntBASIC10.04□□□□□ -0.8
RtcbQ99LF4 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
RtcbQ99LF4 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RtcbQ99LF4 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RtcbQ99LF4 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RtcbQ99LF4 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms