Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gzma-202ENSMUST00000224282 996 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gm10123-201ENSMUST00000075723 490 ntBASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Elavl2-203ENSMUST00000107109 1591 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Elavl2-205ENSMUST00000107111 1552 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gm8428-201ENSMUST00000159919 1784 ntBASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Ugt2b36-201ENSMUST00000094649 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Klf10-202ENSMUST00000226363 2917 ntBASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Nup35Q8R4R6 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm7337-202ENSMUST00000181439 2655 ntBASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Ccdc50-ps-201ENSMUST00000118044 941 ntBASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm11225-201ENSMUST00000118903 1049 ntBASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm11307-201ENSMUST00000121088 929 ntBASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Mir7060-201ENSMUST00000183486 137 ntBASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm18797-201ENSMUST00000190809 1174 ntBASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 AC154028.1-201ENSMUST00000217071 379 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm2649-201ENSMUST00000218825 610 ntBASIC6.37□□□□□ -1.39
Nup35Q8R4R6 AC157570.2-201ENSMUST00000219091 700 ntBASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Fkbp3-202ENSMUST00000220730 579 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Psors1c2-201ENSMUST00000025273 843 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Mir146b-201ENSMUST00000093619 109 ntBASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gimap8-201ENSMUST00000078223 3160 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Nup35Q8R4R6 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms