Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 AW822252-205ENSMUST00000192662 1352 ntBASIC9.39□□□□□ -0.91
Nup88Q8CEC0 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Gm6819-201ENSMUST00000185325 1891 ntBASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Gm11676-201ENSMUST00000120443 490 ntBASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Gm24899-201ENSMUST00000158892 73 ntBASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Gm17572-201ENSMUST00000171455 420 ntBASIC9.39□□□□□ -0.91
Nup88Q8CEC0 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Gm16273-201ENSMUST00000202238 268 ntBASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Gm45255-201ENSMUST00000209943 811 ntBASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Gm18192-201ENSMUST00000210174 941 ntBASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC9.39□□□□□ -0.91
Nup88Q8CEC0 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Erc2-210ENSMUST00000211145 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 AC164883.2-201ENSMUST00000227931 3815 ntBASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 AC125074.1-201ENSMUST00000227970 1331 ntBASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Gm12455-201ENSMUST00000121242 416 ntBASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Gm25845-201ENSMUST00000122588 310 ntBASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Gm13218-201ENSMUST00000128180 265 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Mir3072-201ENSMUST00000175610 83 ntBASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Gm18970-201ENSMUST00000186040 938 ntBASIC9.38□□□□□ -0.91
Nup88Q8CEC0 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Gm29739-201ENSMUST00000191760 529 ntBASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Gm45549-201ENSMUST00000210180 975 ntBASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Gm9118-201ENSMUST00000219246 754 ntBASIC9.38□□□□□ -0.91
Nup88Q8CEC0 AC167019.4-201ENSMUST00000226494 1070 ntBASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 Gm17027-201ENSMUST00000171202 1403 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 AC061963.2-201ENSMUST00000213541 2739 ntBASIC9.38□□□□□ -0.91
Nup88Q8CEC0 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC9.38□□□□□ -0.91
Nup88Q8CEC0 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC9.38□□□□□ -0.91
Nup88Q8CEC0 March7-201ENSMUST00000067542 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm23529-201ENSMUST00000104562 132 ntBASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm9392-201ENSMUST00000119337 554 ntBASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 4833417C18Rik-201ENSMUST00000146868 1269 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm22562-201ENSMUST00000157334 111 ntBASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm23027-201ENSMUST00000158771 158 ntBASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm3239-202ENSMUST00000169675 519 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm5327-201ENSMUST00000182864 1009 ntBASIC9.37□□□□□ -0.91
Nup88Q8CEC0 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm29577-201ENSMUST00000186427 693 ntBASIC9.37□□□□□ -0.91
Nup88Q8CEC0 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC9.37□□□□□ -0.91
Nup88Q8CEC0 Gm18619-201ENSMUST00000222722 1147 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms