Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Gm37987-201ENSMUST00000194999 825 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Pisrt1-201ENSMUST00000195532 515 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Gm43806-201ENSMUST00000201766 469 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 BC060293-201ENSMUST00000207005 1104 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 AC157654.1-201ENSMUST00000224130 820 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 AC139381.1-201ENSMUST00000224215 478 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 CT030646.1-201ENSMUST00000225049 980 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 AC107757.1-201ENSMUST00000226780 357 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 n-R5s28-201ENSMUST00000082814 119 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Gm37315-201ENSMUST00000194347 3479 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Slc29a3-202ENSMUST00000119595 3123 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Cd22-202ENSMUST00000108125 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 1700108F19Rik-205ENSMUST00000190818 1412 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Gm43343-201ENSMUST00000202454 1926 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Gm7328-201ENSMUST00000211123 2225 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Bcl6b-201ENSMUST00000000326 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Bbs9-201ENSMUST00000039798 3382 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Bag6-211ENSMUST00000173550 3536 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Mettl6-209ENSMUST00000228727 2388 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Echdc3-201ENSMUST00000042658 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.34□□□□□ -1.07
Pcdh19Q80TF3 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
Pcdh19Q80TF3 AC103672.2-201ENSMUST00000228146 1687 ntBASIC8.34□□□□□ -1.08
Pcdh19Q80TF3 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Snx25-201ENSMUST00000041582 3206 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Cpne8-202ENSMUST00000064391 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm38012-201ENSMUST00000193022 3029 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Nt5c1b-202ENSMUST00000118657 1792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 4930470B04Rik-201ENSMUST00000192005 1926 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Faf2-203ENSMUST00000126071 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Enox2-205ENSMUST00000114918 3226 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm14356-201ENSMUST00000118322 869 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm13666-201ENSMUST00000120032 799 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm26254-201ENSMUST00000122491 118 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Rpl37rt-202ENSMUST00000124641 294 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm22600-201ENSMUST00000157598 269 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm6611-201ENSMUST00000163830 1272 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm17164-201ENSMUST00000169013 506 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm43129-201ENSMUST00000201237 603 ntTSL 3 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm5609-201ENSMUST00000210008 1267 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 AC131745.3-201ENSMUST00000223582 554 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 AC139350.2-201ENSMUST00000226508 2331 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 AC121542.1-201ENSMUST00000227245 721 ntBASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Cd300ld-201ENSMUST00000045075 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Lrguk-201ENSMUST00000070189 3058 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Cdkl4-201ENSMUST00000086545 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Pcdh19Q80TF3 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 I830077J02Rik-201ENSMUST00000098758 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Slc30a2-202ENSMUST00000105872 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Sp1-202ENSMUST00000163709 3134 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Gm33994-201ENSMUST00000193724 2414 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Pcdh19Q80TF3 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms