Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm9095-201ENSMUST00000117607 881 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm13542-201ENSMUST00000118484 637 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm9097-201ENSMUST00000120514 880 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm12455-201ENSMUST00000121242 416 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 Rps14-203ENSMUST00000122279 667 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm17068-201ENSMUST00000163135 980 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC9.02□□□□□ -0.97
Hmgb1P63158 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC9.02□□□□□ -0.97
Hmgb1P63158 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm9472-201ENSMUST00000221625 526 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 AL590616.1-201ENSMUST00000223339 574 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 AC158531.2-201ENSMUST00000224264 473 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 AC154767.1-201ENSMUST00000224669 358 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 AC154718.1-201ENSMUST00000226676 250 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 AC158519.1-201ENSMUST00000228615 179 ntBASIC9.02□□□□□ -0.97
Hmgb1P63158 Psors1c2-201ENSMUST00000025273 843 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Hmgb1P63158 Them7-201ENSMUST00000068813 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Teddm1a-201ENSMUST00000050660 1317 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hmgb1P63158 Gm20276-201ENSMUST00000216122 2648 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm8605-201ENSMUST00000221619 1370 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm5071-201ENSMUST00000104922 1035 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm15539-201ENSMUST00000118452 566 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm11416-201ENSMUST00000119111 863 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm16031-201ENSMUST00000153253 448 ntTSL 2 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm16260-201ENSMUST00000155141 304 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm25193-201ENSMUST00000176615 97 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm23403-201ENSMUST00000179169 110 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Btg1-ps1-202ENSMUST00000184432 825 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 1700041I07Rik-201ENSMUST00000197536 435 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Kmt5a-212ENSMUST00000198451 1032 ntTSL 3 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm42767-201ENSMUST00000198583 632 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm9523-201ENSMUST00000199146 1159 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm31363-201ENSMUST00000199362 541 ntTSL 3 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm10451-202ENSMUST00000219367 855 ntTSL 2 BASIC9.01□□□□□ -0.97
Hmgb1P63158 AC167202.2-201ENSMUST00000220155 296 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Cinp-205ENSMUST00000221182 774 ntTSL 3 BASIC9.01□□□□□ -0.97
Hmgb1P63158 AC151982.1-201ENSMUST00000223546 464 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 AC125223.1-201ENSMUST00000224004 749 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 AC134577.2-201ENSMUST00000228541 715 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Oard1-201ENSMUST00000046651 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Olfr120-201ENSMUST00000077498 993 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Mrgprx1-201ENSMUST00000094390 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Olfr628-201ENSMUST00000098193 1553 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Defa28-201ENSMUST00000098887 400 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Nfam1-201ENSMUST00000023076 2811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Txndc16-204ENSMUST00000128484 2069 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Hmgb1P63158 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 AC126251.1-201ENSMUST00000228170 2707 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm43062-201ENSMUST00000196302 1319 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
Hmgb1P63158 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hmgb1P63158 Retreg1-203ENSMUST00000226438 2783 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 Gm44873-201ENSMUST00000208490 3428 ntBASIC9.01□□□□□ -0.97
Hmgb1P63158 AC103672.2-201ENSMUST00000228146 1687 ntBASIC9□□□□□ -0.97
Hmgb1P63158 Kbtbd4-202ENSMUST00000111464 2343 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Hmgb1P63158 4921515L22Rik-201ENSMUST00000218993 1537 ntTSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hmgb1P63158 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms