Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Tfpi-206ENSMUST00000111718 2027 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Cdx1P18111 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 AC162467.2-201ENSMUST00000219397 2571 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
Cdx1P18111 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm4863-201ENSMUST00000196907 1381 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Asb14-203ENSMUST00000165929 1817 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.49□□□□□ -1.37
Cdx1P18111 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Snord88c-201ENSMUST00000116853 90 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Gm14682-201ENSMUST00000117977 524 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Gm15666-201ENSMUST00000118054 976 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Gm10224-201ENSMUST00000119496 615 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Mfap5-203ENSMUST00000121656 579 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm13221-201ENSMUST00000121712 430 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 n-R5s76-201ENSMUST00000122700 113 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm11378-201ENSMUST00000130966 229 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm22311-201ENSMUST00000158006 110 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Gm16585-201ENSMUST00000161442 610 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx1P18111 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm3591-202ENSMUST00000179312 396 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm2076-201ENSMUST00000182524 971 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 1700009C05Rik-201ENSMUST00000191101 788 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Ighv1-13-202ENSMUST00000195668 350 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Gm5857-201ENSMUST00000198953 493 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Gm43310-201ENSMUST00000198975 820 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Gm19102-201ENSMUST00000201133 553 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Tmem52b-204ENSMUST00000204741 1001 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm6227-201ENSMUST00000205237 421 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 4933432K03Rik-202ENSMUST00000206244 765 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx1P18111 Ceacam10-203ENSMUST00000206847 662 ntTSL 2 BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm18058-201ENSMUST00000207385 492 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm45454-201ENSMUST00000211484 455 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Cinp-205ENSMUST00000221182 774 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx1P18111 AC116596.2-201ENSMUST00000226642 526 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 AC140799.1-201ENSMUST00000228866 787 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Olfr460-201ENSMUST00000051540 1061 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cdx1P18111 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm9234-201ENSMUST00000077747 492 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Gm4825-201ENSMUST00000079690 408 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Rpl21-ps3-201ENSMUST00000080223 483 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Snora65-201ENSMUST00000083190 130 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cdx1P18111 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cdx1P18111 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.49□□□□□ -1.37
Cdx1P18111 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm13301-201ENSMUST00000121728 2446 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC6.49□□□□□ -1.37
Cdx1P18111 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cdx1P18111 Tmem29-212ENSMUST00000173996 1433 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Cdx1P18111 4933402D24Rik-201ENSMUST00000027102 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Pus3-201ENSMUST00000034615 2019 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Cdx1P18111 Pus10-202ENSMUST00000058163 3559 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 2310040G07Rik-201ENSMUST00000101090 478 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm24938-201ENSMUST00000102225 110 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Gm8662-201ENSMUST00000118644 574 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm11443-201ENSMUST00000118790 479 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm9378-201ENSMUST00000120315 471 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm13576-201ENSMUST00000120851 778 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm23598-201ENSMUST00000157262 144 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm23220-201ENSMUST00000158115 137 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Mir5135-201ENSMUST00000174997 79 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm3147-201ENSMUST00000180178 1221 ntTSL 5 BASIC6.48□□□□□ -1.37
Cdx1P18111 Gm10424-201ENSMUST00000180232 1221 ntTSL 5 BASIC6.48□□□□□ -1.37
Cdx1P18111 Gm17508-201ENSMUST00000181215 681 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cdx1P18111 Gm5205-201ENSMUST00000182253 1003 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm9322-201ENSMUST00000188144 958 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm18118-201ENSMUST00000201064 645 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 Gm8952-201ENSMUST00000206828 1102 ntBASIC6.48□□□□□ -1.37
Cdx1P18111 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms