Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Hmgb3O54879 AC159193.3-201ENSMUST00000221902 2622 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm19031-201ENSMUST00000176280 1365 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm37456-201ENSMUST00000193176 5837 ntBASIC6.44□□□□□ -1.38
Hmgb3O54879 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Hmgb3O54879 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC6.43□□□□□ -1.38
Hmgb3O54879 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Hmgb3O54879 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Nrg4-213ENSMUST00000164721 1927 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Hmgb3O54879 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 AC125409.2-201ENSMUST00000221888 2158 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm14188-201ENSMUST00000105060 168 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm11875-201ENSMUST00000118187 799 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Rps8-ps2-201ENSMUST00000118709 624 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm13655-201ENSMUST00000119695 745 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm14153-201ENSMUST00000119923 1139 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm8215-201ENSMUST00000120627 990 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm14438-201ENSMUST00000121572 624 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm16159-201ENSMUST00000126122 947 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm6851-201ENSMUST00000154478 395 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Hmgb3O54879 Tcstv3-201ENSMUST00000178349 510 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Hmgb3O54879 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm29548-201ENSMUST00000187012 694 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm28105-201ENSMUST00000187788 694 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm37851-201ENSMUST00000193871 889 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Spa17-201ENSMUST00000002013 696 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Nbdy-206ENSMUST00000208373 1061 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Hmgb3O54879 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm45554-201ENSMUST00000210731 1004 ntTSL 5 BASIC6.43□□□□□ -1.38
Hmgb3O54879 4933404K13Rik-203ENSMUST00000217125 1060 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 AC153948.2-201ENSMUST00000218112 505 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 AC153974.1-201ENSMUST00000219012 430 ntTSL 5 BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC6.43□□□□□ -1.38
Hmgb3O54879 AC151982.1-201ENSMUST00000223546 464 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 AC164879.1-201ENSMUST00000227904 1021 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 AC170810.2-201ENSMUST00000228384 1232 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 AC118250.2-201ENSMUST00000228890 416 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Dcpp1-201ENSMUST00000068580 617 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Hmgb3O54879 CT009530.1-201ENSMUST00000227348 2927 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Dctn5-201ENSMUST00000033156 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Spin2c-201ENSMUST00000049999 1309 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC6.43□□□□□ -1.38
Hmgb3O54879 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hmgb3O54879 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Hmgb3O54879 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hmgb3O54879 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 2310040G07Rik-201ENSMUST00000101090 478 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Mir671-201ENSMUST00000102432 98 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm5390-201ENSMUST00000119069 1230 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm12959-201ENSMUST00000119396 403 ntBASIC6.42□□□□□ -1.38
Hmgb3O54879 Gm14746-201ENSMUST00000120309 741 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms