Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Mir6908-201ENSMUST00000184056 63 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm37526-201ENSMUST00000194640 619 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm10043-201ENSMUST00000210691 235 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm18955-201ENSMUST00000223173 649 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Gm3203-201ENSMUST00000197670 2389 ntBASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Ppp6c-201ENSMUST00000028087 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col4a6B1AVK5 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Cc2d2a-201ENSMUST00000048150 5484 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Atxn7l1-210ENSMUST00000144586 3042 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm9311-201ENSMUST00000118042 1269 ntBASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm13229-201ENSMUST00000118238 340 ntBASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm25989-201ENSMUST00000158761 133 ntBASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Ston1-207ENSMUST00000163588 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm7244-201ENSMUST00000164658 455 ntBASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm25692-201ENSMUST00000175444 125 ntBASIC8.06□□□□□ -1.12
Col4a6B1AVK5 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm5654-201ENSMUST00000217787 475 ntBASIC8.06□□□□□ -1.12
Col4a6B1AVK5 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 AC151904.5-201ENSMUST00000218975 549 ntBASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm31711-201ENSMUST00000220687 196 ntBASIC8.06□□□□□ -1.12
Col4a6B1AVK5 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.06□□□□□ -1.12
Col4a6B1AVK5 AC154595.1-201ENSMUST00000225533 1059 ntBASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Cblb-206ENSMUST00000227879 3866 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Snapc4-202ENSMUST00000114115 4368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Olfr718-ps1-201ENSMUST00000164536 3962 ntAPPRIS P5 TSL 5 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a6B1AVK5 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Shc4-201ENSMUST00000042246 4059 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm14824-201ENSMUST00000119421 737 ntBASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm2926-201ENSMUST00000205625 239 ntBASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Gm37649-201ENSMUST00000192079 2232 ntBASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a6B1AVK5 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms