Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm15455-201ENSMUST00000117459 2557 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Supt7l-201ENSMUST00000065388 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gucy2d-201ENSMUST00000098274 3537 ntTSL 5 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm14099-201ENSMUST00000117769 605 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm4918-201ENSMUST00000119420 1084 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm12983-201ENSMUST00000120974 310 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm12970-201ENSMUST00000134911 581 ntTSL 3 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm20690-201ENSMUST00000177341 315 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Ly6a-202ENSMUST00000186526 862 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm29435-201ENSMUST00000191310 689 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm37469-201ENSMUST00000193728 890 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm43515-201ENSMUST00000197930 2141 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm4873-201ENSMUST00000199402 1203 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm43226-201ENSMUST00000202438 259 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm44823-201ENSMUST00000204775 1107 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm29759-201ENSMUST00000205860 327 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 AC162176.1-201ENSMUST00000216490 618 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 AC174797.4-201ENSMUST00000225510 347 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 AC165281.1-201ENSMUST00000225713 1011 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Nasp-202ENSMUST00000030457 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Rfx2-202ENSMUST00000086801 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 D830044D21Rik-201ENSMUST00000143315 3897 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm38012-201ENSMUST00000193022 3029 ntBASIC10.08□□□□□ -0.8
RtcbQ99LF4 Trim17-202ENSMUST00000075141 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Gm16630-201ENSMUST00000180741 3257 ntTSL 5 BASIC10.08□□□□□ -0.8
RtcbQ99LF4 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Lin7a-202ENSMUST00000105280 1634 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm8204-201ENSMUST00000185696 2144 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 Etfdh-202ENSMUST00000120992 2233 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Vnn1-201ENSMUST00000041416 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Zfp286-201ENSMUST00000054654 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Triml2-204ENSMUST00000210136 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 AW822252-205ENSMUST00000192662 1352 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm15574-201ENSMUST00000119937 405 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm5392-201ENSMUST00000122189 789 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm24111-201ENSMUST00000175491 97 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm27427-201ENSMUST00000185134 193 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm28864-201ENSMUST00000189251 644 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm6063-201ENSMUST00000206958 485 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm39121-201ENSMUST00000208847 525 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gcnt2-204ENSMUST00000223570 335 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 AC154692.1-202ENSMUST00000226632 1231 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 AC151902.1-201ENSMUST00000227800 375 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Olfr980-201ENSMUST00000073932 933 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Olfr120-201ENSMUST00000077498 993 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm24411-201ENSMUST00000083428 131 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 Mir146b-201ENSMUST00000093619 109 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm20045-201ENSMUST00000192658 5577 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Zp2-201ENSMUST00000033207 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Gm45705-201ENSMUST00000211831 2134 ntBASIC10.07□□□□□ -0.8
RtcbQ99LF4 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Egf-209ENSMUST00000199615 3211 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RtcbQ99LF4 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms