Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm46313-201ENSMUST00000220463 547 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 AC129975.2-201ENSMUST00000223705 775 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 AC165281.1-201ENSMUST00000225713 1011 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Zfp850-201ENSMUST00000099111 941 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm8728-201ENSMUST00000207367 2178 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm8486-201ENSMUST00000207508 2171 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm8685-201ENSMUST00000207567 2183 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm16443-201ENSMUST00000207909 2184 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm43790-201ENSMUST00000202694 2013 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm17821-201ENSMUST00000223448 1693 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm16050-201ENSMUST00000160626 2363 ntTSL 3 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm12378-201ENSMUST00000116171 1461 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm35172-201ENSMUST00000196037 2649 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm25761-201ENSMUST00000103983 128 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm14099-201ENSMUST00000117769 605 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm12883-201ENSMUST00000117867 364 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm15220-201ENSMUST00000120730 379 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm13358-201ENSMUST00000121427 569 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm4908-201ENSMUST00000121923 1005 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm13776-201ENSMUST00000122236 1261 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm24382-201ENSMUST00000122698 107 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm24063-201ENSMUST00000157491 105 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm22202-201ENSMUST00000158608 311 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Snhg7-201ENSMUST00000181621 139 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Calm5-201ENSMUST00000183198 589 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Mir6974-201ENSMUST00000184381 83 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm8641-201ENSMUST00000186995 826 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm38306-201ENSMUST00000193954 237 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm20136-201ENSMUST00000207501 891 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm7850-201ENSMUST00000212909 712 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm21941-201ENSMUST00000221121 562 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 AC159293.2-201ENSMUST00000222289 424 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 AC123738.1-201ENSMUST00000224796 773 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 AC154252.1-201ENSMUST00000226041 473 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm5619-201ENSMUST00000071172 760 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm6083-201ENSMUST00000075518 357 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm15433-201ENSMUST00000097671 891 ntBASIC7.63□□□□□ -1.19
Clrn1Q8K445 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Clrn1Q8K445 Olfr380-203ENSMUST00000127789 1536 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Gm5681-201ENSMUST00000189217 1533 ntBASIC7.62□□□□□ -1.19
Clrn1Q8K445 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Clrn1Q8K445 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms