Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm12460-201ENSMUST00000117147 357 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 Gm9392-201ENSMUST00000119337 554 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 Gm15028-201ENSMUST00000120295 370 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 Gm11295-201ENSMUST00000121379 803 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 Gm11760-201ENSMUST00000122355 796 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 Gm12780-201ENSMUST00000122458 645 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 Gm25780-201ENSMUST00000122528 253 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Rrp1P56183 Gm8877-201ENSMUST00000172657 655 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC8.95□□□□□ -0.98
Rrp1P56183 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC8.95□□□□□ -0.98
Rrp1P56183 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC8.95□□□□□ -0.98
Rrp1P56183 Gm45900-201ENSMUST00000211879 409 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC8.95□□□□□ -0.98
Rrp1P56183 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 AC124686.1-201ENSMUST00000225546 522 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 AC129017.2-201ENSMUST00000226118 1284 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rrp1P56183 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rrp1P56183 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rrp1P56183 Gm20302-201ENSMUST00000080671 275 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
Rrp1P56183 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rrp1P56183 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rrp1P56183 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rrp1P56183 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rrp1P56183 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.95□□□□□ -0.98
Rrp1P56183 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rrp1P56183 Gm37520-201ENSMUST00000194883 2672 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Rrp1P56183 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rrp1P56183 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rrp1P56183 Gm45210-201ENSMUST00000206401 1577 ntBASIC8.95□□□□□ -0.98
Rrp1P56183 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rrp1P56183 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm44752-201ENSMUST00000207140 3305 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm1982-201ENSMUST00000188615 1887 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm13921-201ENSMUST00000119411 463 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm11955-201ENSMUST00000119801 470 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm13726-201ENSMUST00000121278 794 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm13586-201ENSMUST00000121784 464 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm371-201ENSMUST00000142240 1245 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm16103-201ENSMUST00000163003 1279 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm26505-201ENSMUST00000176208 166 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm43840-201ENSMUST00000199444 484 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm44203-201ENSMUST00000203134 307 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm42402-201ENSMUST00000208341 1054 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 AC123058.1-201ENSMUST00000223748 437 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm28497-201ENSMUST00000189646 3029 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 AC121942.3-201ENSMUST00000225768 1436 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm46339-201ENSMUST00000222720 3539 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.94□□□□□ -0.98
Rrp1P56183 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
Rrp1P56183 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rrp1P56183 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rrp1P56183 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rrp1P56183 Gm3203-201ENSMUST00000197670 2389 ntBASIC8.93□□□□□ -0.98
Rrp1P56183 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rrp1P56183 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.93□□□□□ -0.98
Rrp1P56183 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rrp1P56183 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rrp1P56183 Gm12098-201ENSMUST00000118277 508 ntBASIC8.93□□□□□ -0.98
Rrp1P56183 Gm14746-201ENSMUST00000120309 741 ntBASIC8.93□□□□□ -0.98
Rrp1P56183 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rrp1P56183 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rrp1P56183 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Rrp1P56183 Rpl22l1-206ENSMUST00000194649 525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rrp1P56183 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms