Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Eif4b-201ENSMUST00000169681 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx1P18111 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx1P18111 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx1P18111 Gm1988-201ENSMUST00000188190 2565 ntBASIC6.51□□□□□ -1.37
Cdx1P18111 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
Cdx1P18111 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx1P18111 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cdx1P18111 Homer1-201ENSMUST00000060490 2765 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx1P18111 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
Cdx1P18111 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.51□□□□□ -1.37
Cdx1P18111 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx1P18111 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx1P18111 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm5533-201ENSMUST00000070987 1343 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Tbata-204ENSMUST00000122261 1431 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm42972-201ENSMUST00000196937 5617 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm5721-201ENSMUST00000119845 1696 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Tmem209-201ENSMUST00000064330 1679 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 BC025920-203ENSMUST00000119753 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 AC131743.4-201ENSMUST00000221638 1553 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Mpp1-203ENSMUST00000114092 1378 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm26209-201ENSMUST00000103852 110 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Gm24335-201ENSMUST00000104211 132 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Olfr631-201ENSMUST00000106863 960 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm11621-201ENSMUST00000118253 589 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Gm14860-201ENSMUST00000120277 429 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Gm25844-201ENSMUST00000122587 309 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Gm13999-201ENSMUST00000141511 969 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm13833-201ENSMUST00000146766 719 ntTSL 3 BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm24050-201ENSMUST00000158623 290 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 4930579G18Rik-201ENSMUST00000167763 968 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm3571-201ENSMUST00000170703 1060 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Guk1-205ENSMUST00000170895 743 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Elf5-207ENSMUST00000171693 965 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm17069-201ENSMUST00000172256 490 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Gm5350-201ENSMUST00000182057 1002 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Gm7734-201ENSMUST00000182832 1011 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Mir7655-201ENSMUST00000183376 58 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 1700019D03Rik-204ENSMUST00000186266 623 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm43079-201ENSMUST00000199794 559 ntTSL 3 BASIC6.5□□□□□ -1.37
Cdx1P18111 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm44706-201ENSMUST00000206822 815 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm44561-201ENSMUST00000208869 264 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Olfr46-202ENSMUST00000211771 1190 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
Cdx1P18111 AC154767.1-201ENSMUST00000224669 358 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 AC192434.1-201ENSMUST00000225464 390 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 AC154640.1-204ENSMUST00000227105 648 ntBASIC6.5□□□□□ -1.37
Cdx1P18111 Cox8b-201ENSMUST00000026561 360 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Olfr46-201ENSMUST00000072655 957 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
Cdx1P18111 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cdx1P18111 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Cdx1P18111 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdx1P18111 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Slc30a6-201ENSMUST00000024870 2156 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx1P18111 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Cdx1P18111 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Gm16465-201ENSMUST00000118585 1758 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Ddx47-201ENSMUST00000032326 1764 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Olfr1110-202ENSMUST00000152758 3159 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Cdx1P18111 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC6.49□□□□□ -1.37
Cdx1P18111 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Cdx1P18111 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Gm45512-201ENSMUST00000210432 1553 ntBASIC6.49□□□□□ -1.37
Cdx1P18111 Dppa1-201ENSMUST00000077173 1575 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.49□□□□□ -1.37
Cdx1P18111 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Cdx1P18111 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms