Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm15719-201ENSMUST00000120619 635 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm26070-201ENSMUST00000157500 137 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm24111-201ENSMUST00000175491 97 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm29588-201ENSMUST00000185738 298 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm2098-201ENSMUST00000189146 1763 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm3142-201ENSMUST00000190107 414 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm43917-201ENSMUST00000191984 2360 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 Trdv3-201ENSMUST00000198551 309 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm42589-201ENSMUST00000199097 1751 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Nbdy-206ENSMUST00000208373 1061 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 AC132384.10-201ENSMUST00000217862 1204 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 AC126805.1-201ENSMUST00000225142 262 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Klrb1b-201ENSMUST00000032472 2228 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Olfr120-201ENSMUST00000077498 993 ntBASIC7.65□□□□□ -1.18
Clrn1Q8K445 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC7.65□□□□□ -1.19
Clrn1Q8K445 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Clrn1Q8K445 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Clrn1Q8K445 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
Clrn1Q8K445 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Clrn1Q8K445 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Clrn1Q8K445 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm9776-201ENSMUST00000059598 2980 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Kif9-201ENSMUST00000061155 2956 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm23192-201ENSMUST00000102434 96 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Mir467f-201ENSMUST00000116923 120 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm13750-201ENSMUST00000117621 465 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm8089-201ENSMUST00000122463 968 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm27675-201ENSMUST00000184527 94 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm37517-201ENSMUST00000194004 1289 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm38135-201ENSMUST00000195068 502 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm44412-201ENSMUST00000203018 294 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm44306-201ENSMUST00000203058 203 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm42402-201ENSMUST00000208341 1054 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm45889-201ENSMUST00000209535 1057 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm45549-201ENSMUST00000210180 975 ntBASIC7.64□□□□□ -1.19
Clrn1Q8K445 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC7.64□□□□□ -1.19
Clrn1Q8K445 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms