Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm28938-201ENSMUST00000187029 1495 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm29203-201ENSMUST00000187355 1495 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm29027-202ENSMUST00000187571 1495 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm30045-202ENSMUST00000193438 1495 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm32181-202ENSMUST00000194268 1495 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm36345-202ENSMUST00000194949 1495 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm31422-203ENSMUST00000195198 1495 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm30705-203ENSMUST00000195660 1495 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Olfr152-203ENSMUST00000215394 2172 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm9105-201ENSMUST00000120160 1398 ntBASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm12123-201ENSMUST00000120348 472 ntBASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm14414-201ENSMUST00000120833 573 ntBASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm26184-201ENSMUST00000157686 131 ntBASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm17138-201ENSMUST00000165702 459 ntBASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm7707-201ENSMUST00000165950 1156 ntBASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm9689-201ENSMUST00000210009 428 ntBASIC9.4□□□□□ -0.9
Vps53Q8CCB4 CT030709.1-201ENSMUST00000214443 443 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm5654-201ENSMUST00000217787 475 ntBASIC9.4□□□□□ -0.9
Vps53Q8CCB4 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm7682-202ENSMUST00000202916 1582 ntAPPRIS P5 TSL 5 BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Lipc-201ENSMUST00000034731 1920 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Gm37121-201ENSMUST00000192219 2556 ntBASIC9.4□□□□□ -0.9
Vps53Q8CCB4 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Vps53Q8CCB4 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Vps53Q8CCB4 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm36251-201ENSMUST00000213712 1914 ntTSL 5 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Supt20-211ENSMUST00000200441 2154 ntTSL 5 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm37893-201ENSMUST00000192826 2437 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm26344-201ENSMUST00000104553 132 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm13682-201ENSMUST00000117524 702 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm11901-201ENSMUST00000120412 437 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm25845-201ENSMUST00000122588 310 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm13415-202ENSMUST00000135829 565 ntTSL 3 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Mir7060-201ENSMUST00000183486 137 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm18970-201ENSMUST00000186040 938 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm22149-202ENSMUST00000196259 137 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Spa17-201ENSMUST00000002013 696 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm45255-201ENSMUST00000209943 811 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 AC125019.1-201ENSMUST00000224809 908 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Snora74a-201ENSMUST00000083715 196 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Phc3-202ENSMUST00000064718 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Vps53Q8CCB4 Gm45873-201ENSMUST00000211865 1915 ntBASIC9.39□□□□□ -0.91
Vps53Q8CCB4 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC9.38□□□□□ -0.91
Vps53Q8CCB4 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Vps53Q8CCB4 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms