Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm44245-201ENSMUST00000204304 232 ntBASIC9.28□□□□□ -0.92
Alx1Q8C8B0 Gm19254-201ENSMUST00000204828 294 ntBASIC9.28□□□□□ -0.92
Alx1Q8C8B0 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC9.28□□□□□ -0.92
Alx1Q8C8B0 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Alx1Q8C8B0 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Alx1Q8C8B0 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Alx1Q8C8B0 Gm42700-201ENSMUST00000199071 2437 ntBASIC9.28□□□□□ -0.92
Alx1Q8C8B0 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Alx1Q8C8B0 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Alx1Q8C8B0 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Alx1Q8C8B0 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Alx1Q8C8B0 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Alx1Q8C8B0 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Alx1Q8C8B0 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Alx1Q8C8B0 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Alx1Q8C8B0 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
Alx1Q8C8B0 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Alx1Q8C8B0 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
Alx1Q8C8B0 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Alx1Q8C8B0 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gm14749-201ENSMUST00000121269 333 ntBASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gm22847-201ENSMUST00000157707 105 ntBASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gm6838-201ENSMUST00000172851 582 ntBASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Mir8110-201ENSMUST00000183771 97 ntBASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC9.27□□□□□ -0.93
Alx1Q8C8B0 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 AC102689.1-201ENSMUST00000220511 1090 ntBASIC9.27□□□□□ -0.93
Alx1Q8C8B0 AC129537.1-202ENSMUST00000226619 430 ntBASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Vmn1r41-204ENSMUST00000227039 985 ntBASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gm7493-201ENSMUST00000085919 626 ntBASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gm43800-201ENSMUST00000201868 2731 ntBASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gm4451-201ENSMUST00000186000 1891 ntBASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Gm44187-201ENSMUST00000204735 1929 ntBASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Alx1Q8C8B0 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gm17083-201ENSMUST00000165849 1366 ntBASIC9.26□□□□□ -0.93
Alx1Q8C8B0 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gm43623-201ENSMUST00000199289 2663 ntBASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gm11907-201ENSMUST00000118918 1007 ntBASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gm11585-201ENSMUST00000120901 569 ntBASIC9.26□□□□□ -0.93
Alx1Q8C8B0 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Mir1962-201ENSMUST00000157516 121 ntBASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gm43287-201ENSMUST00000197747 600 ntBASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gm43013-201ENSMUST00000198216 247 ntBASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gm43694-201ENSMUST00000200773 1119 ntBASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gm42887-201ENSMUST00000202469 1119 ntBASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Gm31579-201ENSMUST00000203306 966 ntBASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 AC132474.1-201ENSMUST00000214407 3686 ntBASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Alx1Q8C8B0 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms