Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 AC122887.1-201ENSMUST00000219265 2722 ntBASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm37863-201ENSMUST00000194911 1457 ntBASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Pabpc6-201ENSMUST00000057190 3208 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Cd84-204ENSMUST00000136479 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Fshb-201ENSMUST00000028533 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm26802-201ENSMUST00000181066 2144 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm24893-201ENSMUST00000122745 369 ntBASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm3344-201ENSMUST00000169610 603 ntBASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm37191-201ENSMUST00000193346 388 ntBASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm5305-201ENSMUST00000204010 746 ntBASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm19254-201ENSMUST00000204828 294 ntBASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm44590-201ENSMUST00000206161 391 ntBASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm7419-201ENSMUST00000209962 925 ntBASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 AC151982.1-201ENSMUST00000223546 464 ntBASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 AC126805.1-201ENSMUST00000225142 262 ntBASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Tmem175-203ENSMUST00000120327 1811 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Stam-201ENSMUST00000028050 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Bcas1-201ENSMUST00000013667 2916 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Nolc1-209ENSMUST00000225780 2978 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Prpf31-206ENSMUST00000179769 3125 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm9256-201ENSMUST00000198106 1420 ntBASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sf3b2Q3UJB0 Cenpu-201ENSMUST00000034045 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Olfr320-202ENSMUST00000214662 3029 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Pygb-201ENSMUST00000045441 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Uqcc1-204ENSMUST00000109636 2633 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Fgr-201ENSMUST00000030693 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Cnr2-201ENSMUST00000068830 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Gm25614-201ENSMUST00000104013 133 ntBASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Gm12653-201ENSMUST00000117778 561 ntBASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Gm15739-201ENSMUST00000118049 872 ntBASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Gm12804-201ENSMUST00000121030 999 ntBASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Gm9274-201ENSMUST00000182505 984 ntBASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Gm17530-201ENSMUST00000194336 472 ntBASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Lkaaear1-201ENSMUST00000052416 718 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 9430073C21Rik-201ENSMUST00000145346 2173 ntTSL 2 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Gm26520-201ENSMUST00000180719 1423 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Afap1l2-202ENSMUST00000118800 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sf3b2Q3UJB0 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms