Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm17415-201ENSMUST00000096427 789 ntBASIC6.47□□□□□ -1.37
Hmgb3O54879 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hmgb3O54879 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Hmgb3O54879 Gm6348-201ENSMUST00000200751 1443 ntBASIC6.47□□□□□ -1.37
Hmgb3O54879 Gm6346-201ENSMUST00000201146 1443 ntBASIC6.47□□□□□ -1.37
Hmgb3O54879 AC156790.4-202ENSMUST00000228838 1418 ntBASIC6.47□□□□□ -1.37
Hmgb3O54879 Gm18305-201ENSMUST00000216532 2128 ntBASIC6.47□□□□□ -1.37
Hmgb3O54879 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hmgb3O54879 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Hmgb3O54879 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hmgb3O54879 Gm37893-201ENSMUST00000192826 2437 ntBASIC6.47□□□□□ -1.37
Hmgb3O54879 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hmgb3O54879 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Hmgb3O54879 Hpx-201ENSMUST00000033185 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hmgb3O54879 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Hmgb3O54879 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC6.47□□□□□ -1.37
Hmgb3O54879 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.47□□□□□ -1.37
Hmgb3O54879 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Hmgb3O54879 I830134H01Rik-202ENSMUST00000181592 2755 ntBASIC6.46□□□□□ -1.37
Hmgb3O54879 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Hmgb3O54879 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.46□□□□□ -1.37
Hmgb3O54879 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Hmgb3O54879 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Hmgb3O54879 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Hmgb3O54879 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Hmgb3O54879 Gm8354-201ENSMUST00000189223 1373 ntBASIC6.46□□□□□ -1.37
Hmgb3O54879 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Hmgb3O54879 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
Hmgb3O54879 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm13546-202ENSMUST00000138444 989 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm24786-201ENSMUST00000157379 109 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm22669-201ENSMUST00000158723 318 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm23479-201ENSMUST00000158876 122 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm6586-201ENSMUST00000167028 643 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm8857-201ENSMUST00000170064 1102 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm3591-202ENSMUST00000179312 396 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm2693-201ENSMUST00000189119 571 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm34106-201ENSMUST00000193782 503 ntTSL 3 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm17806-201ENSMUST00000195844 383 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm17889-201ENSMUST00000198410 598 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm43129-201ENSMUST00000201237 603 ntTSL 3 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm44721-201ENSMUST00000206978 472 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm44659-201ENSMUST00000207269 436 ntTSL 2 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm4275-205ENSMUST00000212624 1436 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 AC164123.1-201ENSMUST00000213385 447 ntTSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm40638-201ENSMUST00000216422 682 ntTSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm5789-201ENSMUST00000222643 865 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 4930404H11Rik-202ENSMUST00000222756 1271 ntTSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 CT030646.1-201ENSMUST00000225049 980 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 AC138667.1-201ENSMUST00000225472 316 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 AC115784.1-201ENSMUST00000227687 1010 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Tas2r138-201ENSMUST00000076565 996 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Dppa1-201ENSMUST00000077173 1575 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Rpl7a-ps8-201ENSMUST00000094754 801 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm28720-201ENSMUST00000190728 3156 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.46□□□□□ -1.38
Hmgb3O54879 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC6.46□□□□□ -1.38
Hmgb3O54879 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Hmgb3O54879 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm42648-201ENSMUST00000200774 2505 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 AC160550.2-202ENSMUST00000227812 1861 ntBASIC6.45□□□□□ -1.38
Hmgb3O54879 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Hmgb3O54879 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms