Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm43776-201ENSMUST00000199729 2914 ntBASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a6B1AVK5 Gm17076-201ENSMUST00000165185 1401 ntBASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Zmat3-203ENSMUST00000168566 7672 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm19589-201ENSMUST00000189394 2623 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Slc25a35-201ENSMUST00000018884 3648 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Map4k4-218ENSMUST00000195860 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm8362-201ENSMUST00000168790 1762 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Ovol1-201ENSMUST00000025861 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Spata31d1b-201ENSMUST00000165133 4287 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm37863-201ENSMUST00000194911 1457 ntBASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 n-R5s1-201ENSMUST00000101925 119 ntBASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm12375-201ENSMUST00000119331 921 ntBASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm15316-201ENSMUST00000121082 421 ntBASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm2735-201ENSMUST00000136133 277 ntBASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm18980-201ENSMUST00000199098 1079 ntBASIC8.1□□□□□ -1.11
Col4a6B1AVK5 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Map4k4-213ENSMUST00000193682 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm37048-201ENSMUST00000194827 5578 ntBASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Gm37829-201ENSMUST00000193864 2213 ntBASIC8.1□□□□□ -1.11
Col4a6B1AVK5 Crtam-201ENSMUST00000034519 1876 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Col4a6B1AVK5 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 CT025642.3-201ENSMUST00000225503 4086 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm3822-201ENSMUST00000201941 2935 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 AA986860-201ENSMUST00000039323 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm26321-201ENSMUST00000157740 242 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Pea15b-201ENSMUST00000182806 387 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm21181-201ENSMUST00000186249 330 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm37920-201ENSMUST00000192952 749 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm8896-201ENSMUST00000197434 1106 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm8479-201ENSMUST00000203825 718 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm44590-201ENSMUST00000206161 391 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm45509-201ENSMUST00000209624 1229 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 AC116596.2-203ENSMUST00000227345 731 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 AC154618.2-201ENSMUST00000228299 452 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Rnf19a-201ENSMUST00000022890 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Ehmt1-201ENSMUST00000046227 4554 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Atp7b-201ENSMUST00000006742 6505 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a6B1AVK5 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms