Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm26417-201ENSMUST00000104274 135 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm15009-201ENSMUST00000121387 322 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm22728-201ENSMUST00000158087 129 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm5973-201ENSMUST00000178542 496 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm42424-201ENSMUST00000198319 376 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 AC154757.2-201ENSMUST00000228885 743 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 AC154404.1-201ENSMUST00000223601 2077 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Olfr531-202ENSMUST00000216053 2330 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm11858-201ENSMUST00000117935 838 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm16113-201ENSMUST00000159629 372 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm27360-201ENSMUST00000183487 80 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm42464-201ENSMUST00000196717 417 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm45506-201ENSMUST00000211620 280 ntBASIC7.78□□□□□ -1.16
Cdh23Q99PF4 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Wdr89-202ENSMUST00000187307 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Cdh23Q99PF4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.16
Cdh23Q99PF4 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.77□□□□□ -1.16
Cdh23Q99PF4 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.77□□□□□ -1.16
Cdh23Q99PF4 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
Cdh23Q99PF4 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC7.77□□□□□ -1.16
Cdh23Q99PF4 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC7.77□□□□□ -1.16
Cdh23Q99PF4 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC7.77□□□□□ -1.16
Cdh23Q99PF4 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.77□□□□□ -1.16
Cdh23Q99PF4 Gm42897-201ENSMUST00000201486 2112 ntBASIC7.77□□□□□ -1.16
Cdh23Q99PF4 AC163296.1-202ENSMUST00000218395 661 ntBASIC7.77□□□□□ -1.16
Cdh23Q99PF4 AC163296.1-201ENSMUST00000220004 1266 ntBASIC7.77□□□□□ -1.16
Cdh23Q99PF4 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.77□□□□□ -1.16
Cdh23Q99PF4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
Cdh23Q99PF4 Zfp541-203ENSMUST00000210805 4084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
Cdh23Q99PF4 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm18716-201ENSMUST00000204507 1603 ntBASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm13548-201ENSMUST00000144688 385 ntBASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm25692-201ENSMUST00000175444 125 ntBASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.77□□□□□ -1.17
Cdh23Q99PF4 AC073562.1-201ENSMUST00000222117 401 ntBASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm25133-201ENSMUST00000082647 130 ntBASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Ints10-202ENSMUST00000070713 4192 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gigyf2-205ENSMUST00000172794 4029 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Epn2-202ENSMUST00000108711 4287 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Zfp536-206ENSMUST00000176205 4372 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm11474-201ENSMUST00000120814 277 ntBASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm15644-201ENSMUST00000121764 387 ntBASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm7613-201ENSMUST00000139070 487 ntBASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.77□□□□□ -1.17
Cdh23Q99PF4 Gm26800-201ENSMUST00000180871 349 ntTSL 3 BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms