Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC7.67□□□□□ -1.18
Clrn1Q8K445 Gm18973-201ENSMUST00000205814 511 ntBASIC7.67□□□□□ -1.18
Clrn1Q8K445 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC7.67□□□□□ -1.18
Clrn1Q8K445 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Gm19269-201ENSMUST00000211401 804 ntBASIC7.67□□□□□ -1.18
Clrn1Q8K445 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Clrn1Q8K445 AC131100.1-201ENSMUST00000226328 470 ntBASIC7.67□□□□□ -1.18
Clrn1Q8K445 Tssk4-206ENSMUST00000228041 1217 ntBASIC7.67□□□□□ -1.18
Clrn1Q8K445 Mfap5-201ENSMUST00000032210 946 ntTSL 3 BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Clrn1Q8K445 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Gm21957-201ENSMUST00000073056 438 ntBASIC7.67□□□□□ -1.18
Clrn1Q8K445 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Gm45873-201ENSMUST00000211865 1915 ntBASIC7.67□□□□□ -1.18
Clrn1Q8K445 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Ap3b1-201ENSMUST00000022196 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Clrn1Q8K445 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Clrn1Q8K445 AC131743.4-201ENSMUST00000221638 1553 ntBASIC7.67□□□□□ -1.18
Clrn1Q8K445 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Clrn1Q8K445 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm12455-201ENSMUST00000121242 416 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm22094-201ENSMUST00000158976 117 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm7132-201ENSMUST00000182302 984 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm28677-202ENSMUST00000186904 615 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm28925-201ENSMUST00000188586 168 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm8010-201ENSMUST00000194128 873 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm17979-201ENSMUST00000196646 611 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm44849-201ENSMUST00000207595 484 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm6579-201ENSMUST00000208224 865 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm19228-201ENSMUST00000214030 717 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 AC105169.1-201ENSMUST00000218912 1294 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 AC122356.2-201ENSMUST00000226962 820 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm25129-201ENSMUST00000082651 133 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm43080-201ENSMUST00000199006 2643 ntBASIC7.66□□□□□ -1.18
Clrn1Q8K445 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm39459-201ENSMUST00000215662 1895 ntTSL 5 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Clrn1Q8K445 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clrn1Q8K445 Gm37675-201ENSMUST00000192303 2847 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms