Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Ccnyl1-201ENSMUST00000094898 2923 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm37150-201ENSMUST00000193900 2754 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Ube2v1-201ENSMUST00000060645 1586 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Sla-205ENSMUST00000168589 1412 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Asb11-202ENSMUST00000036858 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm45292-201ENSMUST00000211232 2207 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm11534-202ENSMUST00000129261 470 ntTSL 3 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm25721-201ENSMUST00000157496 171 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Phf11d-202ENSMUST00000160425 1281 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm17258-201ENSMUST00000168462 1266 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm18779-201ENSMUST00000173444 577 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm25690-201ENSMUST00000175439 77 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm27651-201ENSMUST00000183465 246 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Mir8114-201ENSMUST00000183582 111 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm27288-201ENSMUST00000184215 80 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm27597-201ENSMUST00000184365 80 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm27506-201ENSMUST00000184558 80 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm27529-201ENSMUST00000184975 80 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm27907-201ENSMUST00000185101 80 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm44285-201ENSMUST00000203557 940 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 CT009738.1-201ENSMUST00000219031 809 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm5173-201ENSMUST00000219616 950 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm8153-201ENSMUST00000219844 952 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 AC167013.3-201ENSMUST00000228110 989 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Pudp-201ENSMUST00000056460 1044 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm6083-201ENSMUST00000075518 357 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Trim39-205ENSMUST00000173369 2914 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 CT025600.1-202ENSMUST00000220264 2510 ntTSL 5 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Gm44423-201ENSMUST00000203746 3158 ntBASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Vps53Q8CCB4 Klrb1b-201ENSMUST00000032472 2228 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm35172-201ENSMUST00000196037 2649 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 4930503E24Rik-201ENSMUST00000219167 1333 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm14032-201ENSMUST00000117686 1026 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm12987-201ENSMUST00000118562 489 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm6275-201ENSMUST00000118971 1122 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm22562-201ENSMUST00000157334 111 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm24748-201ENSMUST00000157836 108 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm23079-201ENSMUST00000157847 117 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Med6-204ENSMUST00000161211 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm9497-201ENSMUST00000199908 538 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 AC102689.1-201ENSMUST00000220511 1090 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 AC146596.1-201ENSMUST00000223507 223 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm4871-201ENSMUST00000071421 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Mrgprb4-201ENSMUST00000094388 1219 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm40309-201ENSMUST00000202699 1752 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm42847-201ENSMUST00000201732 2553 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC9.41□□□□□ -0.9
Vps53Q8CCB4 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC9.41□□□□□ -0.9
Vps53Q8CCB4 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms