Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccdc60Q8C4J0 Gm26264-201ENSMUST00000083278 159 ntBASIC10.15□□□□□ -0.78
Ccdc60Q8C4J0 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccdc60Q8C4J0 AC126251.1-201ENSMUST00000228170 2707 ntBASIC10.15□□□□□ -0.78
Ccdc60Q8C4J0 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Ccdc60Q8C4J0 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccdc60Q8C4J0 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC10.15□□□□□ -0.78
Ccdc60Q8C4J0 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccdc60Q8C4J0 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ccdc60Q8C4J0 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Ccdc60Q8C4J0 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.79
Ccdc60Q8C4J0 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC10.15□□□□□ -0.79
Ccdc60Q8C4J0 Gm42847-201ENSMUST00000201732 2553 ntBASIC10.15□□□□□ -0.79
Ccdc60Q8C4J0 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ccdc60Q8C4J0 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ccdc60Q8C4J0 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 AC061963.2-201ENSMUST00000213541 2739 ntBASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Gm28497-201ENSMUST00000189646 3029 ntBASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Gm5270-201ENSMUST00000121506 1002 ntBASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Gm29175-201ENSMUST00000189500 402 ntBASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Gm37247-201ENSMUST00000192549 730 ntBASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Gm7478-201ENSMUST00000201054 581 ntBASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Gm45454-201ENSMUST00000211484 455 ntBASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 AC154595.1-201ENSMUST00000225533 1059 ntBASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Gm44249-201ENSMUST00000204538 1805 ntBASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc60Q8C4J0 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm24472-201ENSMUST00000104484 132 ntBASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm7031-201ENSMUST00000173709 919 ntBASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm7678-201ENSMUST00000181879 943 ntBASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 AC162176.1-201ENSMUST00000216490 618 ntBASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Gm38043-201ENSMUST00000195501 5141 ntBASIC10.13□□□□□ -0.79
Ccdc60Q8C4J0 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 n-R5s1-201ENSMUST00000101925 119 ntBASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc60Q8C4J0 Gm14036-201ENSMUST00000118248 480 ntBASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms