Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Gm7151-201ENSMUST00000211511 954 ntBASIC11.23□□□□□ -0.61
Usp47Q8BY87 AC154595.1-201ENSMUST00000225533 1059 ntBASIC11.23□□□□□ -0.61
Usp47Q8BY87 AC139569.1-201ENSMUST00000226080 614 ntBASIC11.23□□□□□ -0.61
Usp47Q8BY87 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Gm17199-201ENSMUST00000097296 416 ntBASIC11.23□□□□□ -0.61
Usp47Q8BY87 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC11.22□□□□□ -0.61
Usp47Q8BY87 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm25167-201ENSMUST00000104188 120 ntBASIC11.22□□□□□ -0.61
Usp47Q8BY87 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Usp47Q8BY87 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm18378-201ENSMUST00000216245 628 ntBASIC11.22□□□□□ -0.61
Usp47Q8BY87 CT009733.1-202ENSMUST00000224941 441 ntBASIC11.22□□□□□ -0.61
Usp47Q8BY87 AC154649.2-201ENSMUST00000228189 808 ntBASIC11.22□□□□□ -0.61
Usp47Q8BY87 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm24046-201ENSMUST00000083111 165 ntBASIC11.22□□□□□ -0.61
Usp47Q8BY87 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC11.22□□□□□ -0.61
Usp47Q8BY87 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp47Q8BY87 AC061963.2-201ENSMUST00000213541 2739 ntBASIC11.22□□□□□ -0.61
Usp47Q8BY87 Gm36993-201ENSMUST00000192983 2980 ntBASIC11.21□□□□□ -0.61
Usp47Q8BY87 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp47Q8BY87 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Gm12344-201ENSMUST00000117087 329 ntBASIC11.21□□□□□ -0.61
Usp47Q8BY87 Gm12851-201ENSMUST00000117920 421 ntBASIC11.21□□□□□ -0.61
Usp47Q8BY87 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC11.21□□□□□ -0.61
Usp47Q8BY87 Gm12219-201ENSMUST00000119198 443 ntBASIC11.21□□□□□ -0.61
Usp47Q8BY87 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC11.21□□□□□ -0.61
Usp47Q8BY87 Mir8099-2-201ENSMUST00000183568 127 ntBASIC11.21□□□□□ -0.61
Usp47Q8BY87 Mir8099-1-201ENSMUST00000184238 127 ntBASIC11.21□□□□□ -0.61
Usp47Q8BY87 Gm9451-201ENSMUST00000188491 604 ntBASIC11.21□□□□□ -0.61
Usp47Q8BY87 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC11.21□□□□□ -0.61
Usp47Q8BY87 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC11.21□□□□□ -0.61
Usp47Q8BY87 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC11.21□□□□□ -0.61
Usp47Q8BY87 AC099629.1-201ENSMUST00000226778 464 ntBASIC11.21□□□□□ -0.61
Usp47Q8BY87 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Usp47Q8BY87 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Usp47Q8BY87 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Usp47Q8BY87 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Usp47Q8BY87 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Usp47Q8BY87 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Usp47Q8BY87 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Usp47Q8BY87 Gm19409-201ENSMUST00000198244 2858 ntBASIC11.21□□□□□ -0.62
Usp47Q8BY87 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Usp47Q8BY87 Gm6729-201ENSMUST00000165173 1452 ntBASIC11.21□□□□□ -0.62
Usp47Q8BY87 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp47Q8BY87 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp47Q8BY87 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC11.2□□□□□ -0.62
Usp47Q8BY87 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Usp47Q8BY87 Gm28653-201ENSMUST00000185494 5276 ntBASIC11.2□□□□□ -0.62
Usp47Q8BY87 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Usp47Q8BY87 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC11.2□□□□□ -0.62
Usp47Q8BY87 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Usp47Q8BY87 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Usp47Q8BY87 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms