Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm4800-201ENSMUST00000215776 1266 ntBASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 AC154649.2-201ENSMUST00000228189 808 ntBASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 AC157212.1-201ENSMUST00000228398 1075 ntBASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 E030024N20Rik-201ENSMUST00000075293 494 ntBASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Mir185-201ENSMUST00000083530 65 ntBASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm43414-201ENSMUST00000197710 3188 ntBASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Arhgap28-203ENSMUST00000164647 2754 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm16050-201ENSMUST00000160626 2363 ntTSL 3 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm37304-201ENSMUST00000193833 2886 ntBASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Olfr549-202ENSMUST00000217478 1891 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 AC091783.1-201ENSMUST00000223614 1613 ntBASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Rap1gds1-201ENSMUST00000029796 3383 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Slc7a13-201ENSMUST00000035890 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm16223-201ENSMUST00000087332 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm15455-201ENSMUST00000117459 2557 ntBASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 CT030170.4-201ENSMUST00000221539 1538 ntTSL 5 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm13673-201ENSMUST00000122056 531 ntBASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm22687-201ENSMUST00000158301 105 ntBASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm22530-201ENSMUST00000158820 118 ntBASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm27350-201ENSMUST00000185109 98 ntBASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm42963-201ENSMUST00000202943 1217 ntBASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Tnfsf8-201ENSMUST00000030047 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Tmem63c-202ENSMUST00000131878 3311 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm45114-201ENSMUST00000208280 1349 ntBASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Art4-201ENSMUST00000032341 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Slc2a5-201ENSMUST00000030826 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gramd1c-202ENSMUST00000114677 3271 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm38383-201ENSMUST00000194131 2660 ntBASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Lin7a-201ENSMUST00000020057 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sf3b2Q3UJB0 Gm38043-201ENSMUST00000195501 5141 ntBASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gsdmc3-202ENSMUST00000185526 2179 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm5997-201ENSMUST00000208154 1864 ntBASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Pus7-206ENSMUST00000148618 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Cd22-210ENSMUST00000189718 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm25757-201ENSMUST00000103986 123 ntBASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Mir7082-201ENSMUST00000183526 92 ntBASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm27602-201ENSMUST00000183861 111 ntBASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm29577-201ENSMUST00000186427 693 ntBASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm37469-201ENSMUST00000193728 890 ntBASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm37724-201ENSMUST00000195240 1221 ntBASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Igkv4-77-201ENSMUST00000199410 352 ntBASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gucy2d-201ENSMUST00000098274 3537 ntTSL 5 BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Lnpk-203ENSMUST00000111993 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Slc1a1-201ENSMUST00000025875 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm44639-201ENSMUST00000205859 3009 ntBASIC10.49□□□□□ -0.73
Sf3b2Q3UJB0 Gm12059-201ENSMUST00000128996 3105 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms