Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Hmgb1P63158 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm37334-201ENSMUST00000192325 2938 ntBASIC9.08□□□□□ -0.96
Hmgb1P63158 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC9.07□□□□□ -0.96
Hmgb1P63158 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm11756-201ENSMUST00000107310 1312 ntAPPRIS P5 TSL 5 BASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm43800-201ENSMUST00000201868 2731 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Ap3b1-201ENSMUST00000022196 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Hmgb1P63158 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Hmgb1P63158 Acad12-201ENSMUST00000041252 3881 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Allc-201ENSMUST00000020965 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Hmgb1P63158 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Ephx2-202ENSMUST00000224698 1985 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC9.07□□□□□ -0.96
Hmgb1P63158 2310040G07Rik-201ENSMUST00000101090 478 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm5530-201ENSMUST00000117185 985 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm14336-201ENSMUST00000117491 475 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm15571-201ENSMUST00000119887 637 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm13161-201ENSMUST00000120609 559 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm12005-201ENSMUST00000121451 379 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm13415-202ENSMUST00000135829 565 ntTSL 3 BASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm6706-201ENSMUST00000145087 318 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm17139-201ENSMUST00000163802 571 ntTSL 5 BASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm3571-201ENSMUST00000170703 1060 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm20508-201ENSMUST00000172480 487 ntTSL 2 BASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm5350-201ENSMUST00000182057 1002 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 4930512B01Rik-202ENSMUST00000188608 983 ntTSL 3 BASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm28266-201ENSMUST00000191410 439 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm37282-201ENSMUST00000191987 164 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm37665-201ENSMUST00000192353 149 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm43835-201ENSMUST00000195932 149 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm17978-201ENSMUST00000195986 769 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm43535-201ENSMUST00000197846 164 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm18402-201ENSMUST00000203834 586 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm44379-201ENSMUST00000204501 164 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm44268-201ENSMUST00000204814 164 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 AC108846.3-201ENSMUST00000214078 247 ntTSL 5 BASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm29783-201ENSMUST00000219398 369 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Lilrb4a-215ENSMUST00000220182 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm7695-201ENSMUST00000220900 641 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 AC159263.2-201ENSMUST00000221593 411 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 4930473H19Rik-202ENSMUST00000222124 1000 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 AC171241.2-201ENSMUST00000228744 892 ntBASIC9.07□□□□□ -0.96
Hmgb1P63158 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Hmgb1P63158 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Hmgb1P63158 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm44423-201ENSMUST00000203746 3158 ntBASIC9.06□□□□□ -0.96
Hmgb1P63158 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Hmgb1P63158 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm11875-201ENSMUST00000118187 799 ntBASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm15580-201ENSMUST00000121587 556 ntBASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm16159-201ENSMUST00000126122 947 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm25767-201ENSMUST00000158572 124 ntBASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm23823-201ENSMUST00000158740 124 ntBASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm8065-201ENSMUST00000164048 605 ntBASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm20914-201ENSMUST00000180372 684 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm7456-201ENSMUST00000182862 1011 ntBASIC9.06□□□□□ -0.96
Hmgb1P63158 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm28588-201ENSMUST00000191581 796 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm2939-201ENSMUST00000198496 478 ntBASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Hmgb1P63158 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC9.06□□□□□ -0.96
Hmgb1P63158 AC154028.1-201ENSMUST00000217071 379 ntTSL 5 BASIC9.06□□□□□ -0.96
Hmgb1P63158 AC153821.1-203ENSMUST00000218105 607 ntTSL 3 BASIC9.06□□□□□ -0.96
Hmgb1P63158 AC163038.2-201ENSMUST00000224851 650 ntBASIC9.06□□□□□ -0.96
Hmgb1P63158 CT030646.1-201ENSMUST00000225049 980 ntBASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms