Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cux1P53564 Esrrg-203ENSMUST00000110939 4833 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cux1P53564 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cux1P53564 Il1rap-201ENSMUST00000023156 4520 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cux1P53564 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC12.14□□□□□ -0.47
Cux1P53564 Psmb11-201ENSMUST00000097177 4247 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cux1P53564 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cux1P53564 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cux1P53564 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC12.13□□□□□ -0.47
Cux1P53564 Gm14904-201ENSMUST00000117067 335 ntBASIC12.13□□□□□ -0.47
Cux1P53564 Gm12601-201ENSMUST00000118994 846 ntBASIC12.13□□□□□ -0.47
Cux1P53564 Gm15362-201ENSMUST00000121459 388 ntBASIC12.13□□□□□ -0.47
Cux1P53564 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC12.13□□□□□ -0.47
Cux1P53564 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 Gm5283-201ENSMUST00000177874 334 ntBASIC12.13□□□□□ -0.47
Cux1P53564 Gm37841-201ENSMUST00000195367 376 ntBASIC12.13□□□□□ -0.47
Cux1P53564 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC12.13□□□□□ -0.47
Cux1P53564 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 AC122360.1-201ENSMUST00000217737 624 ntBASIC12.13□□□□□ -0.47
Cux1P53564 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cux1P53564 Gm37536-201ENSMUST00000194710 2491 ntBASIC12.13□□□□□ -0.47
Cux1P53564 Gm3822-201ENSMUST00000201941 2935 ntBASIC12.13□□□□□ -0.47
Cux1P53564 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cux1P53564 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC12.13□□□□□ -0.47
Cux1P53564 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cux1P53564 Gm17076-201ENSMUST00000165185 1401 ntBASIC12.13□□□□□ -0.47
Cux1P53564 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cux1P53564 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cux1P53564 Gm45793-201ENSMUST00000207900 1342 ntBASIC12.12□□□□□ -0.47
Cux1P53564 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC12.12□□□□□ -0.47
Cux1P53564 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC12.12□□□□□ -0.47
Cux1P53564 Gm44228-201ENSMUST00000204888 2026 ntBASIC12.12□□□□□ -0.47
Cux1P53564 Epas1-201ENSMUST00000024954 5309 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cux1P53564 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cux1P53564 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cux1P53564 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cux1P53564 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC12.12□□□□□ -0.47
Cux1P53564 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC12.12□□□□□ -0.47
Cux1P53564 Gm18860-201ENSMUST00000212029 764 ntBASIC12.12□□□□□ -0.47
Cux1P53564 Gm2398-201ENSMUST00000218347 883 ntBASIC12.12□□□□□ -0.47
Cux1P53564 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cux1P53564 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cux1P53564 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cux1P53564 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cux1P53564 Gm38249-201ENSMUST00000192560 2321 ntBASIC12.12□□□□□ -0.47
Cux1P53564 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cux1P53564 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC12.12□□□□□ -0.47
Cux1P53564 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cux1P53564 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cux1P53564 Ube2k-207ENSMUST00000202082 4506 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cux1P53564 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cux1P53564 Olfr1219-202ENSMUST00000213724 5669 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cux1P53564 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cux1P53564 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cux1P53564 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cux1P53564 Dgkg-202ENSMUST00000089925 3555 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Cux1P53564 Gm15709-201ENSMUST00000118354 213 ntBASIC12.11□□□□□ -0.47
Cux1P53564 Gm11726-201ENSMUST00000121028 424 ntBASIC12.11□□□□□ -0.47
Cux1P53564 Gm13724-201ENSMUST00000122395 1155 ntBASIC12.11□□□□□ -0.47
Cux1P53564 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC12.11□□□□□ -0.47
Cux1P53564 Gm7481-201ENSMUST00000182020 995 ntBASIC12.11□□□□□ -0.47
Cux1P53564 Gm18848-201ENSMUST00000182069 792 ntBASIC12.11□□□□□ -0.47
Cux1P53564 Gm43023-201ENSMUST00000197583 2106 ntBASIC12.11□□□□□ -0.47
Cux1P53564 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cux1P53564 Gm44722-201ENSMUST00000206473 436 ntBASIC12.11□□□□□ -0.47
Cux1P53564 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC12.11□□□□□ -0.47
Cux1P53564 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Gm24411-201ENSMUST00000083428 131 ntBASIC12.11□□□□□ -0.47
Cux1P53564 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cux1P53564 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Cux1P53564 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.11□□□□□ -0.47
Cux1P53564 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC12.11□□□□□ -0.47
Cux1P53564 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC12.11□□□□□ -0.47
Cux1P53564 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Gm38380-201ENSMUST00000195718 2248 ntBASIC12.11□□□□□ -0.47
Cux1P53564 AA986860-201ENSMUST00000039323 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms