Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Hgd-203ENSMUST00000160847 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC9.32□□□□□ -0.92
Col1a1P11087 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Col1a1P11087 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Mkrn2-201ENSMUST00000000449 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Zfp286-201ENSMUST00000054654 3051 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Gm25344-201ENSMUST00000104503 132 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Col1a1P11087 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Gm13240-201ENSMUST00000120042 565 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 Gm12535-201ENSMUST00000121025 484 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 Gm6044-201ENSMUST00000121819 499 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC9.32□□□□□ -0.92
Col1a1P11087 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Col1a1P11087 Gm21181-201ENSMUST00000186249 330 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC9.32□□□□□ -0.92
Col1a1P11087 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Gm43542-201ENSMUST00000199505 379 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 Gm44245-201ENSMUST00000204304 232 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 Gm44931-201ENSMUST00000206056 545 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 AL590616.1-201ENSMUST00000223339 574 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 AC238940.2-201ENSMUST00000224202 330 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 Gm45289-201ENSMUST00000211048 2577 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Arl6-201ENSMUST00000023405 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Napg-201ENSMUST00000025474 3562 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Gm37426-201ENSMUST00000195241 2470 ntBASIC9.32□□□□□ -0.92
Col1a1P11087 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Col1a1P11087 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col1a1P11087 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Gm12394-201ENSMUST00000107981 3348 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Col1a1P11087 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC9.31□□□□□ -0.92
Col1a1P11087 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC9.31□□□□□ -0.92
Col1a1P11087 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC9.31□□□□□ -0.92
Col1a1P11087 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Col1a1P11087 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Cpa5-203ENSMUST00000115139 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Col1a1P11087 Gm14904-201ENSMUST00000117067 335 ntBASIC9.31□□□□□ -0.92
Col1a1P11087 Gm14200-201ENSMUST00000122256 192 ntBASIC9.31□□□□□ -0.92
Col1a1P11087 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Gm2619-202ENSMUST00000166777 651 ntBASIC9.31□□□□□ -0.92
Col1a1P11087 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC9.31□□□□□ -0.92
Col1a1P11087 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC9.31□□□□□ -0.92
Col1a1P11087 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC9.31□□□□□ -0.92
Col1a1P11087 Gm27680-202ENSMUST00000199221 807 ntBASIC9.31□□□□□ -0.92
Col1a1P11087 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Gm45198-201ENSMUST00000206796 591 ntBASIC9.31□□□□□ -0.92
Col1a1P11087 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Gm6887-201ENSMUST00000080945 482 ntBASIC9.31□□□□□ -0.92
Col1a1P11087 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Col1a1P11087 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Mro-201ENSMUST00000119239 1772 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
Col1a1P11087 Gm40309-201ENSMUST00000202699 1752 ntBASIC9.31□□□□□ -0.92
Col1a1P11087 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Col1a1P11087 Clcn7-201ENSMUST00000040729 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Col1a1P11087 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC9.31□□□□□ -0.92
Col1a1P11087 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col1a1P11087 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC9.3□□□□□ -0.92
Col1a1P11087 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Col1a1P11087 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Grhl3-201ENSMUST00000105855 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Gm7562-201ENSMUST00000210502 2537 ntBASIC9.3□□□□□ -0.92
Col1a1P11087 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col1a1P11087 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 157.2 ms