Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 C920021L13Rik-202ENSMUST00000142433 1330 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm4910-201ENSMUST00000119605 366 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Fthl17-ps1-201ENSMUST00000120058 516 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm12587-201ENSMUST00000120180 427 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm13118-201ENSMUST00000120402 549 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm14666-201ENSMUST00000121121 843 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Mfap5-203ENSMUST00000121656 579 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm23429-201ENSMUST00000122486 149 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Ctrcos-201ENSMUST00000128368 322 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 4930528P14Rik-201ENSMUST00000152815 509 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Tpsab1-202ENSMUST00000153118 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Zfp978-202ENSMUST00000154154 1250 ntAPPRIS P5 TSL 5 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm23467-201ENSMUST00000157127 159 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm22339-201ENSMUST00000157718 62 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm22014-201ENSMUST00000158785 290 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm5459-201ENSMUST00000171235 798 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Tpd52-ps-201ENSMUST00000178097 523 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 A330094K24Rik-201ENSMUST00000180530 1027 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm9341-201ENSMUST00000183000 986 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm5710-201ENSMUST00000183020 995 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm27866-201ENSMUST00000184459 171 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm17764-201ENSMUST00000185925 391 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm28614-201ENSMUST00000186483 458 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Cd209b-204ENSMUST00000188386 972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm21742-201ENSMUST00000189352 548 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Cox19-207ENSMUST00000198966 475 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm9497-201ENSMUST00000199908 538 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm43004-201ENSMUST00000201872 703 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm19596-201ENSMUST00000203685 739 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm29799-201ENSMUST00000204061 487 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 4933407I05Rik-203ENSMUST00000214646 796 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Rps25-204ENSMUST00000216076 393 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 2900024D18Rik-201ENSMUST00000220700 569 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Tyrobp-201ENSMUST00000032800 564 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Vmn1r193-201ENSMUST00000057516 960 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Rhox12-201ENSMUST00000096453 920 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Fxyd5-201ENSMUST00000009831 803 ntAPPRIS ALT2 TSL 3 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Ap1b1-202ENSMUST00000101613 3735 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 CT025619.2-201ENSMUST00000216975 2312 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Cavin2-201ENSMUST00000051572 3055 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim39Q9ESN2 Hotair-201ENSMUST00000151949 2006 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim39Q9ESN2 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Trim39Q9ESN2 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim39Q9ESN2 Hp1bp3-203ENSMUST00000105825 4618 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Trim39Q9ESN2 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim39Q9ESN2 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim39Q9ESN2 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim39Q9ESN2 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim39Q9ESN2 Abcb1b-201ENSMUST00000009058 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim39Q9ESN2 Gm32017-201ENSMUST00000215190 1723 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim39Q9ESN2 Gm45629-201ENSMUST00000209629 2546 ntBASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Gm35818-201ENSMUST00000219480 1568 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Sulf2-207ENSMUST00000146497 3808 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Rims1-207ENSMUST00000164877 2294 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Acbd5-201ENSMUST00000028121 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Rad54b-201ENSMUST00000070755 2870 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Gm10644-201ENSMUST00000098595 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Gm36595-201ENSMUST00000218830 2006 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Gm26890-201ENSMUST00000180681 3221 ntTSL 2 BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Gm6733-201ENSMUST00000118302 1920 ntBASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Rsl1d1-201ENSMUST00000119953 1945 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim39Q9ESN2 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms