Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trim29Q8R2Q0 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trim29Q8R2Q0 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Gm43800-201ENSMUST00000201868 2731 ntBASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Gm13466-201ENSMUST00000121515 999 ntBASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Gm24050-201ENSMUST00000158623 290 ntBASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Gm8010-201ENSMUST00000194128 873 ntBASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Gm6394-201ENSMUST00000197077 477 ntBASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Gm45401-201ENSMUST00000209456 733 ntBASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trim29Q8R2Q0 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm3742-201ENSMUST00000220907 1391 ntBASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm12883-201ENSMUST00000117867 364 ntBASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm11649-201ENSMUST00000118214 375 ntBASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm15355-201ENSMUST00000118929 285 ntBASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm15989-201ENSMUST00000121895 498 ntBASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm4908-201ENSMUST00000121923 1005 ntBASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm24083-201ENSMUST00000175174 120 ntBASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm38247-201ENSMUST00000194675 433 ntBASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 AC122533.2-201ENSMUST00000223772 545 ntBASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Gm4825-201ENSMUST00000079690 408 ntBASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 AC120163.1-201ENSMUST00000228618 1680 ntBASIC9.15□□□□□ -0.94
Trim29Q8R2Q0 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trim29Q8R2Q0 Scfd1-205ENSMUST00000219434 2749 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trim29Q8R2Q0 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trim29Q8R2Q0 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trim29Q8R2Q0 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trim29Q8R2Q0 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC9.15□□□□□ -0.95
Trim29Q8R2Q0 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.95
Trim29Q8R2Q0 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Trim29Q8R2Q0 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Trim29Q8R2Q0 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim29Q8R2Q0 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim29Q8R2Q0 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim29Q8R2Q0 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim29Q8R2Q0 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trim29Q8R2Q0 Gm23192-201ENSMUST00000102434 96 ntBASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms