Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 AC160930.2-201ENSMUST00000226608 303 ntBASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Gm43430-201ENSMUST00000196513 3897 ntBASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cchcr1Q8K2I2 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Gm26344-201ENSMUST00000104553 132 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Gm13726-201ENSMUST00000121278 794 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 AA623943-201ENSMUST00000121794 354 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Gm27435-201ENSMUST00000183588 88 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Gm7482-201ENSMUST00000206446 505 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 AC132468.1-201ENSMUST00000224706 499 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 CT009733.1-202ENSMUST00000224941 441 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Gnpnat1-202ENSMUST00000226276 710 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Gm21957-201ENSMUST00000073056 438 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Gm45088-201ENSMUST00000207066 1408 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Gm37109-201ENSMUST00000195475 2254 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Gm42700-201ENSMUST00000199071 2437 ntBASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cchcr1Q8K2I2 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm24335-201ENSMUST00000104211 132 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm12098-201ENSMUST00000118277 508 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm5390-201ENSMUST00000119069 1230 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm36996-201ENSMUST00000194466 250 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm5609-201ENSMUST00000210008 1267 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Olfr472-202ENSMUST00000210420 1083 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 AC155259.1-201ENSMUST00000214794 477 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm8767-201ENSMUST00000215786 1070 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Mir30c-1-201ENSMUST00000083556 89 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Mir146b-201ENSMUST00000093619 109 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm45477-201ENSMUST00000200213 5498 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 AC162467.2-201ENSMUST00000219397 2571 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Gm43221-201ENSMUST00000197612 2071 ntBASIC9.43□□□□□ -0.9
Cchcr1Q8K2I2 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Gm8995-202ENSMUST00000208417 3490 ntBASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Dennd6a-205ENSMUST00000224378 2424 ntBASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Gm11241-201ENSMUST00000117371 896 ntBASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Gm9392-201ENSMUST00000119337 554 ntBASIC9.42□□□□□ -0.9
Cchcr1Q8K2I2 Gm13252-201ENSMUST00000119355 321 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms