Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm9392-201ENSMUST00000119337 554 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm12599-201ENSMUST00000120534 792 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm6706-201ENSMUST00000145087 318 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm26197-201ENSMUST00000175033 115 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm26929-201ENSMUST00000182703 753 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm29068-201ENSMUST00000191607 400 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm18192-201ENSMUST00000210174 941 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm5948-201ENSMUST00000219627 839 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 AC124709.1-201ENSMUST00000227296 620 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 AC163295.2-202ENSMUST00000227763 1053 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Cnot2-209ENSMUST00000167706 1621 ntTSL 5 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm16701-201ENSMUST00000181309 1627 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Efcab3-201ENSMUST00000021029 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Tmem69-202ENSMUST00000106478 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm44007-201ENSMUST00000203845 2189 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Slc44a1-202ENSMUST00000107645 2365 ntTSL 5 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gm42899-201ENSMUST00000197034 2667 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 CT009530.1-201ENSMUST00000227348 2927 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 AC156025.3-201ENSMUST00000225919 3095 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm22271-201ENSMUST00000104035 128 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm25502-201ENSMUST00000104428 131 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm13500-201ENSMUST00000119348 824 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm12932-201ENSMUST00000143705 620 ntTSL 3 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 4930512B01Rik-202ENSMUST00000188608 983 ntTSL 3 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm7115-201ENSMUST00000193706 832 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm45166-201ENSMUST00000209073 683 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm45888-201ENSMUST00000212348 1229 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 AC166358.1-201ENSMUST00000220677 105 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 AC153662.2-201ENSMUST00000221097 120 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 AC156037.2-201ENSMUST00000221284 112 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 AC166341.6-201ENSMUST00000221528 105 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 CT030242.1-201ENSMUST00000221945 125 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 AC124772.2-201ENSMUST00000222049 154 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 AC153663.1-201ENSMUST00000222165 120 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 CT030157.1-201ENSMUST00000222355 148 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 AC150661.2-201ENSMUST00000222418 105 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 AC127242.2-201ENSMUST00000223138 148 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 CT030646.1-201ENSMUST00000225049 980 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 AC130219.2-201ENSMUST00000228765 807 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Mir486-201ENSMUST00000093576 128 ntBASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Nfam1-201ENSMUST00000023076 2811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Gm27166-201ENSMUST00000184476 1930 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Vps53Q8CCB4 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms