Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 AC138284.3-201ENSMUST00000217345 4663 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm24373-201ENSMUST00000104393 132 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm4918-201ENSMUST00000119420 1084 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm23079-201ENSMUST00000157847 117 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm19705-201ENSMUST00000180495 496 ntTSL 5 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm18709-201ENSMUST00000180564 489 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm5920-201ENSMUST00000187390 853 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm29273-201ENSMUST00000188880 262 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm28239-201ENSMUST00000190225 447 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm5307-201ENSMUST00000204772 760 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm44561-201ENSMUST00000208869 264 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 AC126939.4-201ENSMUST00000225360 743 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm6054-201ENSMUST00000078052 378 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC11.25□□□□□ -0.61
Usp47Q8BY87 Gm37873-201ENSMUST00000194571 2280 ntBASIC11.25□□□□□ -0.61
Usp47Q8BY87 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm16044-201ENSMUST00000118475 450 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm13858-201ENSMUST00000118862 671 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm13988-201ENSMUST00000119363 288 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm12692-201ENSMUST00000121092 546 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm15843-201ENSMUST00000146593 529 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Txn-ps1-201ENSMUST00000186385 309 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm20813-201ENSMUST00000186646 705 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm21923-201ENSMUST00000188455 696 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm22149-202ENSMUST00000196259 137 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm38430-201ENSMUST00000209888 1240 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 AC163667.2-201ENSMUST00000223769 791 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm37139-201ENSMUST00000192134 4419 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Gm37233-201ENSMUST00000192173 6263 ntBASIC11.24□□□□□ -0.61
Usp47Q8BY87 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp47Q8BY87 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Gm8204-201ENSMUST00000185696 2144 ntBASIC11.23□□□□□ -0.61
Usp47Q8BY87 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 Gm15251-201ENSMUST00000177947 883 ntBASIC11.23□□□□□ -0.61
Usp47Q8BY87 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC11.23□□□□□ -0.61
Usp47Q8BY87 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms