Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 AC124103.1-201ENSMUST00000227564 1027 ntBASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 AC164978.1-201ENSMUST00000228608 4011 ntBASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smarcc2Q6PDG5 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm3742-201ENSMUST00000220907 1391 ntBASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 AC158605.4-201ENSMUST00000219013 3361 ntBASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm23358-201ENSMUST00000103887 110 ntBASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm41-201ENSMUST00000116183 1023 ntBASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm15578-201ENSMUST00000117320 475 ntBASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm8802-201ENSMUST00000118633 740 ntBASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm11258-201ENSMUST00000121086 1218 ntBASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm17235-201ENSMUST00000169128 964 ntBASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm25082-201ENSMUST00000177296 255 ntBASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm44902-201ENSMUST00000206177 805 ntBASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 AV026068-225ENSMUST00000225042 490 ntBASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gpr55-201ENSMUST00000086975 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smarcc2Q6PDG5 Gm28720-201ENSMUST00000190728 3156 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm26344-201ENSMUST00000104553 132 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm13683-201ENSMUST00000119497 1076 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm13674-201ENSMUST00000121276 823 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Snhg7-201ENSMUST00000181621 139 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm26980-201ENSMUST00000183321 395 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Scgb2b30-201ENSMUST00000187013 336 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm29145-201ENSMUST00000189914 456 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Scgb2b10-201ENSMUST00000191403 318 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm37293-201ENSMUST00000191658 295 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Gm19810-201ENSMUST00000218521 251 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Smarcc2Q6PDG5 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms