Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Gm42856-201ENSMUST00000200848 2852 ntBASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Mterf2-201ENSMUST00000050813 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Gm43686-201ENSMUST00000197351 2439 ntBASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Ufl1-202ENSMUST00000102994 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Gm12098-201ENSMUST00000118277 508 ntBASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Gm38203-201ENSMUST00000191815 245 ntBASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Gm7394-201ENSMUST00000209138 1032 ntBASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 1700009N14Rik-201ENSMUST00000029955 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 n-R5s193-201ENSMUST00000082864 109 ntBASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Casp8-203ENSMUST00000190213 1628 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Havcr1-203ENSMUST00000109223 1982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Ttc39c-204ENSMUST00000169401 1950 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Elovl4-201ENSMUST00000034796 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Nobox-201ENSMUST00000031749 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Cdc5l-201ENSMUST00000024727 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b2Q3UJB0 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sf3b2Q3UJB0 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sf3b2Q3UJB0 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Sf3b2Q3UJB0 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sf3b2Q3UJB0 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sf3b2Q3UJB0 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sf3b2Q3UJB0 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC10.52□□□□□ -0.72
Sf3b2Q3UJB0 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Rmi1-205ENSMUST00000225828 3594 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Vmn2r53-201ENSMUST00000170412 2421 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Plod1-201ENSMUST00000019199 3243 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Gm11218-201ENSMUST00000121364 1214 ntBASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Gm17973-201ENSMUST00000174509 520 ntBASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Gm28864-201ENSMUST00000189251 644 ntBASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Gm44162-201ENSMUST00000203543 544 ntBASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Gm44987-201ENSMUST00000206578 750 ntTSL 3 BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Olfr120-201ENSMUST00000077498 993 ntBASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Gm18697-201ENSMUST00000191179 2126 ntBASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Gpr83-201ENSMUST00000034408 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Pxmp4-201ENSMUST00000000896 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Aldh2-201ENSMUST00000031411 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Smoc1-202ENSMUST00000110347 3496 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Gm37446-201ENSMUST00000193015 4136 ntBASIC10.52□□□□□ -0.73
Sf3b2Q3UJB0 Fam221b-201ENSMUST00000056474 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Numb-204ENSMUST00000117217 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Zfp750-201ENSMUST00000092298 3232 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm5759-201ENSMUST00000119203 811 ntBASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm7560-201ENSMUST00000187748 873 ntBASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC10.51□□□□□ -0.73
Sf3b2Q3UJB0 Gm29273-201ENSMUST00000188880 262 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms