Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
RxraP28700 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Gm43917-201ENSMUST00000191984 2360 ntBASIC8.12□□□□□ -1.11
RxraP28700 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.12□□□□□ -1.11
RxraP28700 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
RxraP28700 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RxraP28700 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
RxraP28700 Msr1-201ENSMUST00000026021 1424 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
RxraP28700 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
RxraP28700 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.11□□□□□ -1.11
RxraP28700 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
RxraP28700 AC101875.1-201ENSMUST00000222666 2223 ntBASIC8.11□□□□□ -1.11
RxraP28700 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Gm36938-201ENSMUST00000191612 2696 ntBASIC8.11□□□□□ -1.11
RxraP28700 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
RxraP28700 Gm24938-201ENSMUST00000102225 110 ntBASIC8.11□□□□□ -1.11
RxraP28700 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC8.11□□□□□ -1.11
RxraP28700 Gm8813-201ENSMUST00000155930 595 ntBASIC8.11□□□□□ -1.11
RxraP28700 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC8.11□□□□□ -1.11
RxraP28700 Aste1-204ENSMUST00000167674 1227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC8.11□□□□□ -1.11
RxraP28700 Gm21013-201ENSMUST00000184952 1201 ntBASIC8.11□□□□□ -1.11
RxraP28700 Gm18301-201ENSMUST00000185261 888 ntBASIC8.11□□□□□ -1.11
RxraP28700 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC8.11□□□□□ -1.11
RxraP28700 Gm28530-201ENSMUST00000190473 577 ntBASIC8.11□□□□□ -1.11
RxraP28700 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC8.11□□□□□ -1.11
RxraP28700 Gm38051-201ENSMUST00000193740 433 ntBASIC8.11□□□□□ -1.11
RxraP28700 Gm17979-201ENSMUST00000196646 611 ntBASIC8.11□□□□□ -1.11
RxraP28700 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Gm43461-201ENSMUST00000202351 996 ntBASIC8.11□□□□□ -1.11
RxraP28700 Rps3-205ENSMUST00000208532 489 ntTSL 5 BASIC8.11□□□□□ -1.11
RxraP28700 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Gm45549-201ENSMUST00000210180 975 ntBASIC8.11□□□□□ -1.11
RxraP28700 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC8.11□□□□□ -1.11
RxraP28700 Gm19810-201ENSMUST00000218521 251 ntBASIC8.11□□□□□ -1.11
RxraP28700 AC124397.1-201ENSMUST00000224296 653 ntBASIC8.11□□□□□ -1.11
RxraP28700 AC131100.1-201ENSMUST00000226328 470 ntBASIC8.11□□□□□ -1.11
RxraP28700 AC160930.2-201ENSMUST00000226608 303 ntBASIC8.11□□□□□ -1.11
RxraP28700 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RxraP28700 Gm26226-201ENSMUST00000082509 116 ntBASIC8.11□□□□□ -1.11
RxraP28700 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RxraP28700 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Olfr1347-202ENSMUST00000207339 1737 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
RxraP28700 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RxraP28700 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
RxraP28700 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RxraP28700 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RxraP28700 AC120347.1-201ENSMUST00000223326 1639 ntBASIC8.11□□□□□ -1.11
RxraP28700 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RxraP28700 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.1□□□□□ -1.11
RxraP28700 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
RxraP28700 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC8.1□□□□□ -1.11
RxraP28700 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
RxraP28700 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.1□□□□□ -1.11
RxraP28700 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.1□□□□□ -1.11
RxraP28700 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 Gm13750-201ENSMUST00000117621 465 ntBASIC8.1□□□□□ -1.11
RxraP28700 Gm11676-201ENSMUST00000120443 490 ntBASIC8.1□□□□□ -1.11
RxraP28700 Gm14186-201ENSMUST00000120804 137 ntBASIC8.1□□□□□ -1.11
RxraP28700 Gm11765-201ENSMUST00000121173 1205 ntBASIC8.1□□□□□ -1.11
RxraP28700 Defa-ps16-201ENSMUST00000121939 171 ntBASIC8.1□□□□□ -1.11
RxraP28700 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC8.1□□□□□ -1.11
RxraP28700 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC8.1□□□□□ -1.11
RxraP28700 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RxraP28700 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC8.1□□□□□ -1.11
RxraP28700 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms