Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Tmem229b-204ENSMUST00000174072 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Zscan18-205ENSMUST00000211392 3709 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm43686-201ENSMUST00000197351 2439 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Baalc-201ENSMUST00000163313 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gja1-206ENSMUST00000220069 3182 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Slc12a8-201ENSMUST00000059056 3166 ntAPPRIS P2 TSL 2 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Clec10a-202ENSMUST00000102571 1496 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm15666-201ENSMUST00000118054 976 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Stard4-202ENSMUST00000118990 648 ntTSL 2 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm15925-201ENSMUST00000120641 1881 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm14054-201ENSMUST00000120744 704 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm5644-201ENSMUST00000122039 465 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Taar7c-ps-201ENSMUST00000122123 1055 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm2866-201ENSMUST00000166053 481 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm17074-201ENSMUST00000167284 556 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 H2-Pb-201ENSMUST00000172731 531 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Tmem29-212ENSMUST00000173996 1433 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm20548-205ENSMUST00000174864 787 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm23563-201ENSMUST00000174900 251 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Smarce1-ps1-201ENSMUST00000180067 1077 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm26817-201ENSMUST00000180446 339 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 1700023G09Rik-201ENSMUST00000194513 1460 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm43582-201ENSMUST00000196149 343 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Mir3107-201ENSMUST00000199351 90 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm31520-201ENSMUST00000203048 733 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm7397-201ENSMUST00000208298 361 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Numb-201ENSMUST00000021647 1815 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Olfr1491-206ENSMUST00000216622 1725 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 AC132384.13-201ENSMUST00000219556 1159 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 AC154603.2-201ENSMUST00000223896 577 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 AC134869.4-201ENSMUST00000224724 609 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 AC123629.1-201ENSMUST00000225669 1364 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 AC102000.1-201ENSMUST00000226247 727 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 AC121357.1-201ENSMUST00000227365 608 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 AC135083.1-201ENSMUST00000227773 1331 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 AC130547.1-201ENSMUST00000228079 1047 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 4930428N03Rik-201ENSMUST00000038250 986 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Olfr1184-201ENSMUST00000050038 936 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Pfdn5-202ENSMUST00000062492 464 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Scp2-ps2-201ENSMUST00000072166 478 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm5513-201ENSMUST00000072982 1218 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm5121-201ENSMUST00000085711 627 ntBASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Olfr1279-201ENSMUST00000090329 942 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Npm1-202ENSMUST00000093201 1192 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Ubxn8-201ENSMUST00000095349 2808 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Sept2-215ENSMUST00000179353 3219 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Elovl4-201ENSMUST00000034796 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Tmem87a-202ENSMUST00000090046 2897 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim39Q9ESN2 Gm37549-201ENSMUST00000194096 4065 ntBASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Cyp2j9-201ENSMUST00000055693 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Gm29427-201ENSMUST00000188520 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Ephx1-202ENSMUST00000111068 1699 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Hdac9-203ENSMUST00000209667 1635 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Dgat2l6-201ENSMUST00000037541 1640 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 BC025920-203ENSMUST00000119753 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim39Q9ESN2 Esr2-203ENSMUST00000110421 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms