Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Alx1Q8C8B0 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Alx1Q8C8B0 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Alx1Q8C8B0 Ube2k-207ENSMUST00000202082 4506 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Alx1Q8C8B0 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Alx1Q8C8B0 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Alx1Q8C8B0 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Alx1Q8C8B0 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Alx1Q8C8B0 AC158686.1-201ENSMUST00000218068 2332 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm13255-201ENSMUST00000117255 547 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm14645-201ENSMUST00000118597 417 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm15730-201ENSMUST00000121828 415 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Scarna17-201ENSMUST00000158064 79 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm5698-201ENSMUST00000178317 724 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm6799-201ENSMUST00000186919 573 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm29739-201ENSMUST00000191760 529 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Mir1897-202ENSMUST00000198006 79 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm43008-201ENSMUST00000202346 286 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 AC124715.1-201ENSMUST00000228480 754 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Gm37980-201ENSMUST00000194420 1910 ntBASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Alx1Q8C8B0 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Klf6-201ENSMUST00000000080 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm44014-201ENSMUST00000205150 1509 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm24071-201ENSMUST00000104520 132 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm12838-201ENSMUST00000116278 325 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm12851-201ENSMUST00000117920 421 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm10651-201ENSMUST00000118212 609 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm15836-201ENSMUST00000119952 793 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm15079-201ENSMUST00000121943 216 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm15928-201ENSMUST00000122455 280 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 n-R5s115-201ENSMUST00000179019 119 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm43560-201ENSMUST00000198100 773 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm43553-201ENSMUST00000200900 685 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 AC137950.1-201ENSMUST00000228553 515 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 n-R5s193-201ENSMUST00000082864 109 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 AC061963.2-201ENSMUST00000213541 2739 ntBASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Alx1Q8C8B0 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms