Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Olfr444-202ENSMUST00000204092 1472 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Ighv14-2-201ENSMUST00000103467 351 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Pcna-ps1-201ENSMUST00000118453 738 ntBASIC9.11□□□□□ -0.95
Hmgb1P63158 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Gm15694-201ENSMUST00000121984 283 ntBASIC9.11□□□□□ -0.95
Hmgb1P63158 Olfr330-201ENSMUST00000134055 1134 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Gm12055-201ENSMUST00000143643 793 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC9.11□□□□□ -0.95
Hmgb1P63158 Gm18342-201ENSMUST00000186987 694 ntBASIC9.11□□□□□ -0.95
Hmgb1P63158 Gm2427-201ENSMUST00000189121 881 ntBASIC9.11□□□□□ -0.95
Hmgb1P63158 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC9.11□□□□□ -0.95
Hmgb1P63158 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Spa17-201ENSMUST00000002013 696 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Gm6312-201ENSMUST00000204060 1194 ntBASIC9.11□□□□□ -0.95
Hmgb1P63158 Olfr46-202ENSMUST00000211771 1190 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Hmgb1P63158 CT025561.1-201ENSMUST00000214972 674 ntBASIC9.11□□□□□ -0.95
Hmgb1P63158 Olfr977-ps1-201ENSMUST00000217438 943 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC9.11□□□□□ -0.95
Hmgb1P63158 Gm18783-201ENSMUST00000220465 1151 ntBASIC9.11□□□□□ -0.95
Hmgb1P63158 AC154450.1-201ENSMUST00000220911 485 ntBASIC9.11□□□□□ -0.95
Hmgb1P63158 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Mrps36-ps1-201ENSMUST00000061311 306 ntBASIC9.11□□□□□ -0.95
Hmgb1P63158 Olfr770-201ENSMUST00000062314 936 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Olfr46-201ENSMUST00000072655 957 ntAPPRIS P2 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
Hmgb1P63158 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Hmgb1P63158 Elavl2-203ENSMUST00000107109 1591 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Elavl2-205ENSMUST00000107111 1552 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC9.11□□□□□ -0.95
Hmgb1P63158 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC9.11□□□□□ -0.95
Hmgb1P63158 AC153729.1-201ENSMUST00000214055 2562 ntBASIC9.11□□□□□ -0.95
Hmgb1P63158 Gm43917-201ENSMUST00000191984 2360 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm5442-201ENSMUST00000202121 2034 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Ceacam1-202ENSMUST00000098668 1478 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm42700-201ENSMUST00000199071 2437 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 A330076C08Rik-202ENSMUST00000223513 1937 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm25594-201ENSMUST00000102274 82 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm12178-201ENSMUST00000120545 330 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Tle6-213ENSMUST00000151858 627 ntTSL 3 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm26211-201ENSMUST00000158578 129 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm8323-201ENSMUST00000168436 1201 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm4904-201ENSMUST00000178243 1195 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm2871-201ENSMUST00000179984 1204 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm8305-201ENSMUST00000180022 1195 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm29577-201ENSMUST00000186427 693 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm28723-201ENSMUST00000188640 1001 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 1700009C05Rik-201ENSMUST00000191101 788 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm42821-201ENSMUST00000199771 489 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm45436-201ENSMUST00000210729 469 ntTSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm14267-208ENSMUST00000228324 1189 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Hmgb1P63158 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm36993-201ENSMUST00000192983 2980 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 Gm14802-201ENSMUST00000121944 1885 ntBASIC9.1□□□□□ -0.95
Hmgb1P63158 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms